General features

Gene IDMPN001
TypeCDS
From692
To1834
Strand+
General namednaN
DefinitionDNA polymerase III, beta chain
nt length1143
aa length380
m.w.43855.83
COG[L] Replication, recombination and repair


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mypeMYPE20 dnaN DNA polymerase III subunit beta 1450:25861574.8e-40
mgengi|12044851 DNA polymerase III, subunit beta (dnaN) [Mycoplasma genitalium]5307.1e-153
mpulgi|15828473 DNA POLYMERASE III, BETA CHAIN [Mycoplasma pulmonis]603.4e-11
mmobgi|47458837 DNA polymerase III beta chain [Mycoplasma mobile 163K]941.7e-21
mmycgi|42560562 DNA POLYMERASE III, BETA CHAIN [Mycoplasma mycoides subsp. mycoides SC]933.9e-21
mgalgi|31544930 DnaN [Mycoplasma gallisepticum R]1096.5e-26
uuregi|13357635 DNA pol III beta chain [Ureaplasma urealyticum]781.2e-16
phytgi|39938488 DNA polymerase III beta subunit [Onion yellows phytoplasma]811.2e-17
bsubgi|16077070 DNA polymerase III (beta subunit) [Bacillus subtilis]1022.8e-23
cacegi|15893300 DNA polymerase III beta subunit [Clostridium acetobutylicum]801.9e-16
ecoligi|16131715 hypothetical protein b3875 [Escherichia coli K12]285.9e-01

*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

DNA_pol3_beta_31DNA polymerase III beta subunit, C-te258-380148.91.6e-41

DNA_pol3_beta1DNA polymerase III beta subunit, N-te1-12122.79.5e-07

DNA_pol3_beta_21DNA polymerase III beta subunit, cent135-256-37.20.051

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|13507740DnaN 19480.0e+00
gi|66880408DNA polymerase III, beta subunit [synthetic Mycoplasma genitalium JCVI-1.0] 14185.8e-155
gi|6226601DNA polymerase III subunit beta 13522.2e-147
gi|1361492DNA polymerase III beta chain - Mycoplasma genitalium 9509.3e-101
gi|497645DNA polymerase III beta subunit 3397.1e-30
gi|26553454DNA polymerase III subunit beta [Mycoplasma penetrans HF-2] 3262.2e-28
gi|124520296DNA polymerase III, beta subunit [Bacillus coagulans 36D1] 2501.6e-19
gi|149182289DNA polymerase III subunit beta [Bacillus sp. SG-1] 2456.3e-19
gi|30018280DNA polymerase III, beta chain [Bacillus cereus ATCC 14579] 2447.4e-19
gi|167937956DNA polymerase III subunit beta [Bacillus cereus G9842] 2447.6e-19


Maintained by Jun Ishikawa