General features

Gene IDMPN003
TypeCDS
From2869
To4821
Strand+
General namegyrB
DefinitionDNA gyrase subunit B
nt length1953
aa length650
m.w.73809.15
COG[L] Replication, recombination and repair


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mypeMYPE30 gyrB DNA gyrase subunit B 3002:49518645.8e-09
mgengi|12044853 DNA gyrase subunit B (gyrB) [Mycoplasma genitalium]12002.4e-127
mpulgi|15829210 DNA GYRASE SUBUNIT B [Mycoplasma pulmonis]7193.0e-07
mmobgi|47458936 DNA gyrase subunit b [Mycoplasma mobile 163K]7197.0e-10
mmycgi|42560566 DNA Gyrase Subunit B [Mycoplasma mycoides subsp. mycoides SC]6543.2e-10
mgalgi|31544928 GyrB [Mycoplasma gallisepticum R]8752.9e-74
uuregi|13357637 DNA topoisomerase - DNA gyrase subunit B [Ureaplasma urealyticum]8632.5e-12
phytgi|39938984 DNA gyrase beta subunit [Onion yellows phytoplasma]6054.5e-175
bsubgi|16077074 DNA gyrase (subunit B) [Bacillus subtilis]6934.7e-10
cacegi|15893304 DNA gyrase (topoisomerase II) B subunit [Clostridium acetobutylicum]6862.2e-09
ecoligi|49176395 DNA gyrase subunit B [Escherichia coli K12]5086.2e-145

*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

DNA_gyraseB1DNA gyrase B228-408317.13.5e-92

DNA_gyraseB_C1DNA gyrase B subunit, carboxyl terminus573-639159.87.9e-45

HATPase_c1Histidine kinase-, DNA gyrase B-, and H35-180102.31.7e-27

Toprim1Toprim domain435-54626.40.0001

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|13507742DNA gyrase subunit B [Mycoplasma pneumoniae M129] 34940.0e+00
gi|1209515gyrase B 34280.0e+00
gi|12044853DNA gyrase, B subunit [synthetic Mycoplasma genitalium JCVI-1.0] 32130.0e+00
gi|31544928GyrB [Mycoplasma gallisepticum R] 23250.0e+00
gi|26553455DNA gyrase subunit B [Mycoplasma penetrans HF-2] 23020.0e+00
gi|13357637DNA gyrase, B subunit [Ureaplasma parvum serovar 6 str. ATCC 27818] 22930.0e+00
gi|171920695DNA gyrase, B subunit [Ureaplasma urealyticum serovar 9 str. ATCC 33175] 22890.0e+00
gi|603237DNA gyrase B subunit 22580.0e+00
gi|15829210DNA GYRASE SUBUNIT B [Mycoplasma pulmonis] 19100.0e+00
gi|47458936DNA gyrase subunit b [Mycoplasma mobile 163K] 19090.0e+00


Maintained by Jun Ishikawa