General features

Gene IDMPN220
TypeCDS
From272462
To273142
Strand+
General namerplA
Definition50S ribosomal protein L1
nt length681
aa length226
m.w.24354.34
COG[-] not in COGs


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mypeMYPE260 ribosomal protein L1 36106:371162087.1e-56
mgengi|12044934 ribosomal protein L1 (rpL1) [Mycoplasma genitalium]3652.1e-103
mpulgi|15828481 50S RIBOSOMAL PROTEIN L1 [Mycoplasma pulmonis]2271.1e-61
mmobgi|47458974 50S ribosomal protein l1 [Mycoplasma mobile 163K]2162.1e-58
mmycgi|42561511 50S ribosomal protein L1 [Mycoplasma mycoides subsp. mycoides SC]2332.8e-63
mgalgi|31544869 RplA [Mycoplasma gallisepticum R]3016.0e-84
uuregi|13358104 ribosomal protein L1 [Ureaplasma urealyticum]2409.9e-66
phytgi|39938743 ribosomal protein L1 [Onion yellows phytoplasma]2061.8e-55
bsubgi|16077171 ribosomal protein L1 (BL1) [Bacillus subtilis]2212.1e-59
cacegi|15896395 Ribosomal protein L1 [Clostridium acetobutylicum]1891.4e-49
ecoligi|16131814 50S ribosomal protein L1 [Escherichia coli K12]1913.5e-50

*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

Ribosomal_L11Ribosomal protein L1p/L10e family15-219379.84.9e-111

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|13507959ribosomal protein L1 [Mycoplasma pneumoniae M129] 11573.9e-125
gi|12044934ribosomal protein L1 [synthetic Mycoplasma genitalium JCVI-1.0] 9603.2e-102
gi|31544869RplA [Mycoplasma gallisepticum R] 7579.1e-79
gi|167940697ribosomal protein L1 [Ureaplasma urealyticum serovar 9 str. ATCC 33175] 6261.5e-63
gi|13358104ribosomal protein L1 [Ureaplasma parvum serovar 6 str. ATCC 27818] 6252.0e-63
gi|83319637ribosomal protein L1 [Mycoplasma capricolum subsp. capricolum ATCC 27343] 6011.2e-60
gi|18815904550S ribosomal protein L1 [Mycoplasma mycoides subsp. mycoides LC str. GM12] 6001.6e-60
gi|4256151150S ribosomal protein L1 [Mycoplasma mycoides subsp. mycoides SC str. PG1] 5956.2e-60
gi|167757652hypothetical protein CLORAM_03202 [Clostridium ramosum DSM 1402] 5858.6e-59
gi|169351740hypothetical protein CLOSPI_02521 [Clostridium spiroforme DSM 1552] 5858.7e-59


Maintained by Jun Ishikawa