General features

Gene IDMPN228
General namerpsF
Definition30S ribosomal protein S6
nt length648
aa length215
COG[J] Translation, ribosomal structure and biogenesis

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mypeMYPE1140 rpsF ribosomal protein S6 141878:142315887.7e-20
mgengi|12044942 ribosomal protein S6 (rpS6) [Mycoplasma genitalium]2752.6e-76
mpulgi|15829082 30S RIBOSOMAL PROTEIN S6 [Mycoplasma pulmonis]433.6e-06
mmobgi|47459062 30S ribosomal protein s6 [Mycoplasma mobile 163K]486.9e-08
mmycgi|42560587 30S ribosomal protein S6 [Mycoplasma mycoides subsp. mycoides SC]432.3e-06
mgalgi|31544819 RpsF [Mycoplasma gallisepticum R]1072.0e-25
uuregi|13358118 ribosomal protein S6 [Ureaplasma urealyticum]916.9e-21
phytgi|39938495 ribosomal protein S6 [Onion yellows phytoplasma]402.1e-05
cacegi|15896955 Ribosomal protein S6 [Clostridium acetobutylicum]445.3e-06
ecoligi|16132022 30S ribosomal protein S6 [Escherichia coli K12]382.7e-04

*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result

ModelNo.DescriptionPosition (aa)ScoreE-value

Ribosomal_S61Ribosomal protein S61-90155.51.6e-43

BLAST search result (top 10 hits)

gi|13507967ribosomal protein S6 [Mycoplasma pneumoniae M129] 11288.4e-122
gi|12044942ribosomal protein S6 [synthetic Mycoplasma genitalium JCVI-1.0] 7076.2e-73
gi|66880321COG0360: Ribosomal protein S6 [Mycoplasma genitalium G-37] 5911.4e-59
gi|31544819RpsF [Mycoplasma gallisepticum R] 2587.1e-21
gi|4220414Homology to ribosomal protein S6 X04022 [Mycoplasma genitalium] 2229.8e-17
gi|26553568ribosomal protein S6 [Mycoplasma penetrans HF-2] 2183.2e-16
gi|1335811830S ribosomal protein S6 [Ureaplasma parvum serovar 6 str. ATCC 27818] 2165.2e-16
gi|16794072930S ribosomal protein S6 [Ureaplasma urealyticum serovar 9 str. ATCC 33175] 2131.1e-15
gi|12665488630S ribosomal protein S6 [Cyanothece sp. CCY0110] 1331.9e-06
gi|17203763830s ribosomal protein S6 [Cyanothece sp. ATCC 51142] 1295.4e-06

Maintained by Jun Ishikawa