General features

Gene IDMPN229
TypeCDS
From280430
To280930
Strand+
General namessb
DefinitionSingle-strand binding protein
nt length501
aa length166
m.w.18424.05
COG[L] Replication, recombination and repair


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mypeMYPE1150 ssb single-strand DNA binding protein 142348:142917487.8e-08
mgengi|12044943 single-stranded DNA-binding protein (ssb) [Mycoplasma genitalium]1968.3e-53
mpulgi|15829081 SINGLE-STRAND BINDING PROTEIN (SSB) (HELIX-DESTABILIZING PROTEIN) [Mycoplasma pulmonis]386.0e-05
mmycgi|42560968 Hypothetical protein MSC_0433 [Mycoplasma mycoides subsp. mycoides SC]285.2e-02
uuregi|13358117 single-strand binding protein [Ureaplasma urealyticum]662.2e-13
phytgi|39939050 single-stranded DNA-binding protein [Onion yellows phytoplasma]316.6e-03
bsubgi|16081142 single-strand DNA-binding protein [Bacillus subtilis]367.9e-04
cacegi|15895648 Single-strand DNA-binding protein, ssb [Clostridium acetobutylicum]442.7e-06
ecoligi|16131885 single-strand DNA-binding protein [Escherichia coli K12]352.6e-03

*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmyc, Mycoplasma mycoides; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

SSB1Single-strand binding protein family1-102111.62.5e-30

tRNA_anti1OB-fold nucleic acid binding domain4-10210.40.36

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|13507968single-stranded DNA binding protein [Mycoplasma pneumoniae M129] 8641.7e-91
gi|12044943single-strand DNA-binding protein [synthetic Mycoplasma genitalium JCVI-1.0] 5146.3e-51
gi|474074puative 19 kDa protein [Mycoplasma pneumoniae] 3775.4e-35
gi|13358117single-strand binding protein [Ureaplasma parvum serovar 6 str. ATCC 27818] 1392.1e-07
gi|171920641single-strand binding protein [Ureaplasma urealyticum serovar 9 str. ATCC 33175] 1383.0e-07
gi|66880322hypothetical protein MgenG_01000194 [Mycoplasma genitalium G-37] 1365.0e-07
gi|189426459single-strand binding protein [Geobacter lovleyi SZ] 1356.1e-07
gi|78188206Single-strand binding protein [Chlorobium chlorochromatii CaD3] 1339.3e-07
gi|21674759single-strand binding protein [Chlorobium tepidum TLS] 1321.3e-06
gi|54112683NT02FT0349 [synthetic construct] 1293.3e-06


Maintained by Jun Ishikawa