General features

Gene IDMPN230
TypeCDS
From280920
To281234
Strand+
General namerpsR
Definition30S ribosomal protein S18
nt length315
aa length104
m.w.12386.36
COG[-] not in COGs


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mypeMYPE1160 rpsR ribosomal protein S18 142944:143408752.5e-16
mgengi|12044944 ribosomal protein S18 (rpS18) [Mycoplasma genitalium]1542.1e-40
mpulgi|15829080 30S RIBOSOMAL PROTEIN S18 [Mycoplasma pulmonis]474.3e-08
mmobgi|47459060 30S ribosomal protein s18 [Mycoplasma mobile 163K]521.1e-09
mmycgi|42560585 30S ribosomal protein S18 [Mycoplasma mycoides subsp. mycoides SC]551.7e-10
mgalgi|31544817 RpsR [Mycoplasma gallisepticum R]822.1e-18
uuregi|13358116 ribosomal protein S18 [Ureaplasma urealyticum]552.2e-10
phytgi|39938497 ribosomal protein S18 [Onion yellows phytoplasma]552.0e-10
bsubgi|16081141 ribosomal protein S18 [Bacillus subtilis]563.8e-10
cacegi|15896953 Ribosomal protein S18 [Clostridium acetobutylicum]611.1e-11
ecoligi|16132024 30S ribosomal protein S18 [Escherichia coli K12]627.8e-12

*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

Ribosomal_S181Ribosomal protein S1845-99100.94.5e-27

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|13507969ribosomal protein S18 [Mycoplasma pneumoniae M129] 5569.1e-56
gi|66880323COG0238: Ribosomal protein S18 [Mycoplasma genitalium G-37] 3945.1e-37
gi|12044944ribosomal protein S18 [synthetic Mycoplasma genitalium JCVI-1.0] 3945.3e-37
gi|31544817RpsR [Mycoplasma gallisepticum R] 2081.8e-15
gi|148265697SSU ribosomal protein S18P [Geobacter uraniireducens Rf4] 1831.4e-12
gi|26553570ribosomal protein S18 [Mycoplasma penetrans HF-2] 1821.8e-12
gi|5402044430s ribosomal protein S18 [Mycoplasma hyopneumoniae 7448] 1769.4e-12
gi|154503456hypothetical protein RUMGNA_01280 [Ruminococcus gnavus ATCC 29149] 1741.5e-11
gi|163784039ribosomal protein S18 [Hydrogenivirga sp. 128-5-R1-1] 1741.7e-11
gi|188997592ribosomal protein S18 [Sulfurihydrogenibium sp. YO3AOP1] 1741.8e-11


Maintained by Jun Ishikawa