General features

Gene IDMPN292
TypeCDS
From349804
To348875
Strand-
General nameyceC
DefinitionHypothetical pseudouridine synthase
nt length930
aa length309
m.w.35228.33
COG[J] Translation, ribosomal structure and biogenesis


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mypeMYPE1310 rluB pseudouridine synthase 157719:1568231695.5e-44
mgengi|12045061 sfhB protein, putative [Mycoplasma genitalium]3761.8e-106
mpulgi|15828769 RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE D (PSEUDOURIDYLATE SYNTHASE) (URACIL HYDROLYASE) [Mycoplasma pulmonis]1902.9e-50
mmobgi|47459161 ribosomal large subunit pseudouridine synthase D [Mycoplasma mobile 163K]1619.0e-42
mmycgi|42561113 ribosomal large subunit pseudouridylate synthase D [Mycoplasma mycoides subsp. mycoides SC]1889.2e-50
mgalgi|31544413 RluA [Mycoplasma gallisepticum R]2919.4e-81
uuregi|13357873 pseudouridine synthase (uracil hydrolase) [Ureaplasma urealyticum]2263.8e-61
phytgi|39938617 pseudouridylate synthases [Onion yellows phytoplasma]1663.0e-43
bsubgi|16078610 alternate gene name: ylmL~similar to hypothetical proteins [Bacillus subtilis]1591.5e-40
cacegi|15895383 Predicted pseudouridylate synthase, YLYB B.subtilis ortholog [Clostridium acetobutylicum]1861.1e-48
ecoligi|16129049 23S rRNA pseudouridylate synthase [Escherichia coli K12]1401.4e-34

*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

PseudoU_synth_21RNA pseudouridylate synthase88-238230.15.5e-66

S41S4 domain11-5756.01.4e-13

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|13508031ribosomal large subunit pseudouridine synthase D-like protein [Mycoplasma pneumo... 16490.0e+00
gi|12045061pseudouridine synthase, RluA family [synthetic Mycoplasma genitalium JCVI-1.0] 9061.0e-95
gi|31544413RluA [Mycoplasma gallisepticum R] 7562.1e-78
gi|13357873pseudouridine synthase (uracil hydrolase) [Ureaplasma parvum serovar 3 str. ATCC... 5725.5e-57
gi|171920977pseudouridine synthase, RluA family [Ureaplasma urealyticum serovar 9 str. ATCC ... 5681.4e-56
gi|188592412pseudouridine synthase (uracil hydrolase) [Ureaplasma urealyticum serovar 10] 5635.3e-56
gi|167971859pseudouridylate synthase, 23S RNA-specific [Ureaplasma parvum serovar 6 str. ATC... 5626.7e-56
gi|169350183hypothetical protein CLOSPI_00927 [Clostridium spiroforme DSM 1552] 5482.7e-54
gi|20807974Pseudouridylate synthase, 23S RNA-specific [Thermoanaerobacter tengcongensis MB4... 5375.0e-53
gi|160914264hypothetical protein EUBDOL_00274 [Eubacterium dolichum DSM 3991] 5367.6e-53


Maintained by Jun Ishikawa