General features

Gene IDMPN361
TypeCDS
From430628
To431707
Strand+
General nameprfA
DefinitionPeptide chain release factor 1
nt length1080
aa length359
m.w.40779.24
COG[J] Translation, ribosomal structure and biogenesis


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mypeMYPE650 prfA peptide chain release factor 1 74531:756104064.2e-115
mgengi|12045113 peptide chain release factor 1 (prfA) [Mycoplasma genitalium]5982.0e-173
mpulgi|15828576 PEPTIDE CHAIN RELEASE FACTOR 1 (RF-1) [Mycoplasma pulmonis]2925.0e-81
mmobgi|47459025 peptide chain release factor 1 [Mycoplasma mobile 163K]2801.6e-77
mmycgi|42560702 peptide chain release factor 1 [Mycoplasma mycoides subsp. mycoides SC]3303.1e-92
mgalgi|31544341 PrfA [Mycoplasma gallisepticum R]4431.8e-126
uuregi|13357561 peptide chain release factor 1 [Ureaplasma urealyticum]4193.7e-119
phytgi|39938500 protein chain release factor A [Onion yellows phytoplasma]2755.5e-76
bsubgi|16080754 peptide chain release factor 1 [Bacillus subtilis]3139.9e-87
cacegi|15896138 Protein chain release factor A [Clostridium acetobutylicum]3083.9e-85
ecoligi|16129174 peptide chain release factor 1 [Escherichia coli K12]2691.9e-73

*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

RF-11RF-1 domain209-322263.16.7e-76

PCRF1PCRF domain66-180173.08.5e-49

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|13508100peptide chain release factor 1 [Mycoplasma pneumoniae M129] 18960.0e+00
gi|12045113peptide chain release factor 1 [synthetic Mycoplasma genitalium JCVI-1.0] 16069.0e-177
gi|46576715Peptide chain release factor 1 (RF-1) 11415.8e-123
gi|31544341PrfA [Mycoplasma gallisepticum R] 11416.4e-123
gi|171920548peptide chain release factor 1 [Ureaplasma urealyticum serovar 9 str. ATCC 33175... 11201.7e-120
gi|13357561peptide chain release factor 1 [Ureaplasma parvum serovar 6 str. ATCC 27818] 11164.7e-120
gi|188592638peptide chain release factor 1 [Ureaplasma urealyticum serovar 10] 11165.2e-120
gi|26553517peptide chain release factor 1 [Mycoplasma penetrans HF-2] 10691.4e-114
gi|66880160COG0216: Protein chain release factor A [Mycoplasma genitalium G-37] 9731.9e-103
gi|58038522Bacterial Peptide Chain Release Factor 1 (RF-1) [Gluconobacter oxydans 621H] 9167.2e-97


Maintained by Jun Ishikawa