General features

Gene IDMPN521
TypeCDS
From642760
To643260
Strand+
General nameygl3
DefinitionHypothetical tRNA/rRNA methyltransferase
nt length501
aa length166
m.w.19356.13
COG[J] Translation, ribosomal structure and biogenesis


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mypeMYPE100 cspR rRNA methylase 13682:141671379.8e-35
mgengi|12045205 rRNA methylase, putative [Mycoplasma genitalium]2905.5e-81
mpulgi|15828774 TRNA/RRNA METHYLTRANSFERASE [Mycoplasma pulmonis]1049.0e-25
mmobgi|47458956 spoU class tRNA/rRNA methylase [Mycoplasma mobile 163K]1083.9e-26
mmycgi|42561144 rRNA Methylase (Spou-family) [Mycoplasma mycoides subsp. mycoides SC]1085.1e-26
mgalgi|31544522 CspR [Mycoplasma gallisepticum R]1492.4e-38
uuregi|13357828 rRNA methylase [Ureaplasma urealyticum]1231.1e-30
bsubgi|16077958 rRNA methylase homolog [Bacillus subtilis]1251.0e-30
cacegi|15893988 Predicted tRNA-methylase (SpoU class) [Clostridium acetobutylicum]1042.2e-24
ecoligi|16131477 putative tRNA/rRNA methyltransferase [Escherichia coli K12]1081.8e-25

*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

SpoU_methylase1SpoU rRNA Methylase family5-150135.71.5e-37

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|13508260putative rRNA methylase [Mycoplasma pneumoniae M129] 9018.1e-96
gi|12045205RNA methyltransferase, TrmH family, group 2 [synthetic Mycoplasma genitalium JCV... 7379.9e-77
gi|31544522CspR [Mycoplasma gallisepticum R] 3892.1e-36
gi|26553462rRNA methylase [Mycoplasma penetrans HF-2] 3623.1e-33
gi|27468455RNA methyltransferase, TrmH family, group 2 [Staphylococcus epidermidis RP62A] 3498.8e-32
gi|170016981Predicted rRNA methylase (SpoU class) [Leuconostoc citreum KM20] 3452.8e-31
gi|42518756hypothetical protein LJ_0831 [Lactobacillus johnsonii NCC 533] 3443.0e-31
gi|153810968hypothetical protein RUMOBE_01359 [Ruminococcus obeum ATCC 29174] 3434.0e-31
gi|15900400CspR [Streptococcus pneumoniae MLV-016] 3434.6e-31
gi|148988231CspR [Streptococcus pneumoniae CDC0288-04] 3425.5e-31


Maintained by Jun Ishikawa