General features

Gene IDMPN541
TypeCDS
From661126
To660863
Strand-
General namerpsT
Definition30S ribosomal protein S20
nt length264
aa length87
m.w.9970.49
COG[J] Translation, ribosomal structure and biogenesis


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mypeMYPE480 rpsT ribosomal protein S20 59137:58901512.9e-09
mgengi|12045224 ribosomal protein S20 (rpsT) [Mycoplasma genitalium]1341.2e-34
mpulgi|15829127 30S RIBOSOMAL PROTEIN S20 [Mycoplasma pulmonis]351.5e-04
mmobgi|47459355 30S ribosomal protein s20 [Mycoplasma mobile 163K]365.6e-05
mmycgi|42560645 30S ribosomal protein S20 [Mycoplasma mycoides subsp. mycoides SC]474.5e-08
mgalgi|31544331 RpsT [Mycoplasma gallisepticum R]681.7e-14
uuregi|13357870 ribosomal protein S20 [Ureaplasma urealyticum]527.6e-10
phytgi|39938567 ribosomal protein S20 [Onion yellows phytoplasma]381.3e-05
bsubgi|16079609 ribosomal protein S20 (BS20) [Bacillus subtilis]363.0e-04
cacegi|15894556 Ribosomal protein S20 [Clostridium acetobutylicum]485.2e-08
ecoligi|16128017 30S ribosomal protein S20 [Escherichia coli K12]424.5e-06

*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

Ribosomal_S20p1Ribosomal protein S202-7889.41.2e-23

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|13508280ribosomal protein S20 [Mycoplasma pneumoniae M129] 4261.1e-40
gi|12045224ribosomal protein S20 [synthetic Mycoplasma genitalium JCVI-1.0] 3264.0e-29
gi|31541175RpsT [Mycoplasma gallisepticum R] 1436.9e-08
gi|16151151330S ribosomal protein S20 [Mycoplasma gallisepticum R] 1437.1e-08
gi|2501099230S ribosomal protein S20 [Streptococcus agalactiae NEM316] 1177.6e-05
gi|33236623ribosomal protein S20 [Chlamydophila pneumoniae TW-183] 1141.5e-04
gi|15618663S20 ribosomal protein [Chlamydophila pneumoniae J138] 1141.6e-04
gi|2819932130S ribosomal protein S20 [Xylella fastidiosa Temecula1] 1131.7e-04
gi|116627668SSU ribosomal protein S20P [Streptococcus thermophilus LMD-9] 1132.1e-04
gi|81588574ribosomal protein S20 [Streptococcus agalactiae A909] 1122.3e-04


Maintained by Jun Ishikawa