General features

Gene IDMYPE100
TypeCDS
From13682
To14167
Strand+
General namecspR
DefinitionrRNA methylase
nt length486
aa length161
m.w.18975.60
COG[J] Translation, ribosomal structure and biogenesis


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN521 ygl3 Hypothetical tRNA/rRNA methyltransferase 642760:6432601375.7e-35
mgengi|12045205 rRNA methylase, putative [Mycoplasma genitalium]1413.0e-36
mpulgi|15828774 TRNA/RRNA METHYLTRANSFERASE [Mycoplasma pulmonis]1062.2e-25
mmobgi|47458956 spoU class tRNA/rRNA methylase [Mycoplasma mobile 163K]1045.3e-25
mmycgi|42561144 rRNA Methylase (Spou-family) [Mycoplasma mycoides subsp. mycoides SC]1117.5e-27
mgalgi|31544522 CspR [Mycoplasma gallisepticum R]1653.2e-43
uuregi|13357828 rRNA methylase [Ureaplasma urealyticum]1231.4e-30
bsubgi|16077958 rRNA methylase homolog [Bacillus subtilis]1351.5e-33
cacegi|15893988 Predicted tRNA-methylase (SpoU class) [Clostridium acetobutylicum]1173.2e-28
ecoligi|16131477 putative tRNA/rRNA methyltransferase [Escherichia coli K12]951.5e-21

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

SpoU_methylase1SpoU rRNA Methylase family1-149135.81.3e-37

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26553462rRNA methylase [Mycoplasma penetrans HF-2] 7654.2e-80
gi|31544522CspR [Mycoplasma gallisepticum R] 3864.0e-36
gi|15900400CspR [Streptococcus pneumoniae MLV-016] 3497.3e-32
gi|148988231CspR [Streptococcus pneumoniae CDC0288-04] 3489.4e-32
gi|153853541hypothetical protein DORLON_00910 [Dorea longicatena DSM 13814] 3471.5e-31
gi|116515392TrmH family RNA methyltransferase [Streptococcus pneumoniae D39] 3461.9e-31
gi|15902476rRNA methylase [Streptococcus pneumoniae R6] 3462.1e-31
gi|124522441RNA methyltransferase, TrmH family, group 2 [Bacillus coagulans 36D1] 3452.2e-31
gi|149005602RNA methyltransferase, TrmH family protein [Streptococcus pneumoniae SP18-BS74] 3443.0e-31
gi|12045205RNA methyltransferase, TrmH family, group 2 [synthetic Mycoplasma genitalium JCV... 3443.2e-31


Maintained by Jun Ishikawa