General features

Gene IDMYPE10020
TypeCDS
From1322265
To1321714
Strand-
General namerplF
Definitionribosomal protein L6
nt length552
aa length183
m.w.19442.55
COG[J] Translation, ribosomal structure and biogenesis


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN180 rplF 50S ribosomal protein L6 225496:2260501746.7e-46
mgengi|12045019 ribosomal protein L6 (rpL6) [Mycoplasma genitalium]1683.7e-44
mpulgi|15829043 50S RIBOSOMAL PROTEIN L6 [Mycoplasma pulmonis]1701.5e-44
mmobgi|47459085 50S ribosomal protein l6 [Mycoplasma mobile 163K]1631.5e-42
mmycgi|42561255 50S RIBOSOMAL PROTEIN L6 [Mycoplasma mycoides subsp. mycoides SC]1985.7e-53
mgalgi|31544270 RplF [Mycoplasma gallisepticum R]1862.1e-49
uuregi|13357806 ribosomal protein L6 [Ureaplasma urealyticum]2075.3e-56
phytgi|39938701 ribosomal protein L6 [Onion yellows phytoplasma]1561.6e-40
bsubgi|16077199 ribosomal protein L6 (BL8) [Bacillus subtilis]1551.8e-39
cacegi|15896368 Ribosomal protein L6 [Clostridium acetobutylicum]1572.6e-40
ecoligi|16131184 50S ribosomal protein L6 [Escherichia coli K12]1543.4e-39

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

Ribosomal_L62Ribosomal protein L611-83, 91-166154.92.4e-43

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26554450ribosomal protein L6 [Mycoplasma penetrans HF-2] 8071.1e-84
gi|4256125550S RIBOSOMAL PROTEIN L6 [Mycoplasma mycoides subsp. mycoides SC str. PG1] 4441.1e-42
gi|8331973650S ribosomal protein L6 [Mycoplasma capricolum subsp. capricolum ATCC 27343] 4431.7e-42
gi|2766518ribosomal protein L6 [Mycoplasma gallisepticum] 4295.8e-41
gi|5036495350S ribosomal protein L6 [Mesoplasma florum L1] 4261.4e-40
gi|31544270RplF [Mycoplasma gallisepticum R] 4251.9e-40
gi|1335780650S ribosomal protein L6 [Ureaplasma parvum serovar 6 str. ATCC 27818] 4251.9e-40
gi|13507919ribosomal protein L6 [Mycoplasma pneumoniae M129] 4054.0e-38
gi|78042739ribosomal protein L6 [Carboxydothermus hydrogenoformans Z-2901] 3865.9e-36
gi|118049746ribosomal protein L6 [Comamonas testosteroni KF-1] 3841.2e-35


Maintained by Jun Ishikawa