General features

Gene IDMYPE10090
TypeCDS
From1325729
To1324476
Strand-
General namerpsC
Definitionribosomal protein S3
nt length1254
aa length417
m.w.47611.00
COG[J] Translation, ribosomal structure and biogenesis


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN171 rpsC 30S ribosomal protein S3 221796:2226172402.2e-65
mgengi|12045010 ribosomal protein S3 (rpS3) [Mycoplasma genitalium]2481.0e-67
mpulgi|15829052 30S RIBOSOMAL PROTEIN S3 [Mycoplasma pulmonis]1772.1e-46
mmobgi|47459076 30S ribosomal protein s3 [Mycoplasma mobile 163K]1928.9e-51
mmycgi|42561264 30S RIBOSOMAL PROTEIN S3 [Mycoplasma mycoides subsp. mycoides SC]2342.7e-63
mgalgi|31544261 RpsC [Mycoplasma gallisepticum R]2741.7e-75
uuregi|13357797 ribosomal protein S3 [Ureaplasma urealyticum]2662.8e-73
phytgi|39938692 ribosomal protein S3 [Onion yellows phytoplasma]1927.3e-51
bsubgi|16077190 ribosomal protein S3 (BS3) [Bacillus subtilis]2085.4e-55
cacegi|15896377 Ribosomal protein S3 [Clostridium acetobutylicum]1918.3e-50
ecoligi|16131193 30S ribosomal protein S3 [Escherichia coli K12]1841.2e-47

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

Ribosomal_S3_C1Ribosomal protein S3, C-terminal doma122-205148.22.6e-41

Ribosomal_S3_N1Ribosomal protein S3, N-terminal doma1-63105.61.7e-28

KH_21KH domain64-12058.13.4e-14

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26554457ribosomal protein S3 [Mycoplasma penetrans HF-2] 18840.0e+00
gi|26554460ribosomal protein L22 [Mycoplasma penetrans HF-2] 7351.0e-75
gi|31541105RpsC [Mycoplasma gallisepticum R] 6622.6e-67
gi|161511517ribosomal protein S3 [Mycoplasma gallisepticum] 6622.6e-67
gi|188568655ribosomal protein S3 [Ureaplasma urealyticum serovar 2] 6471.5e-65
gi|13357797ribosomal protein S3 [Ureaplasma urealyticum serovar 9 str. ATCC 33175] 6461.8e-65
gi|12045010ribosomal protein S3 [synthetic Mycoplasma genitalium JCVI-1.0] 6103.1e-61
gi|13507910ribosomal protein S3 [Mycoplasma pneumoniae M129] 5933.1e-59
gi|42561264ribosomal protein S3 [Mycoplasma capricolum subsp. capricolum ATCC 27343] 5601.9e-55
gi|95005930S ribosomal protein [Mycoplasma capricolum subsp. capricolum ATCC 27343] 5565.7e-55


Maintained by Jun Ishikawa