General features

Gene IDMYPE10170
TypeCDS
From1330163
To1329522
Strand-
General namerplD
Definitionribosomal protein L4
nt length642
aa length213
m.w.24087.63
COG[J] Translation, ribosomal structure and biogenesis


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN166 rplD 50S ribosomal protein L4 218833:2194711671.3e-43
mgengi|12045005 ribosomal protein L4 (rpL4) [Mycoplasma genitalium]1722.4e-45
mpulgi|15829058 50S RIBOSOMAL PROTEIN L4 [Mycoplasma pulmonis]1201.7e-29
mmobgi|47459071 50S ribosomal protein l4 [Mycoplasma mobile 163K]1393.8e-35
mmycgi|42561269 50S RIBOSOMAL PROTEIN L4 [Mycoplasma mycoides subsp. mycoides SC]1493.8e-38
mgalgi|31544256 RplD [Mycoplasma gallisepticum R]1992.3e-53
uuregi|13357792 ribosomal protein L4 [Ureaplasma urealyticum]1931.7e-51
phytgi|39938687 ribosomal protein L4 [Onion yellows phytoplasma]1177.7e-29
bsubgi|16077185 ribosomal protein L4 [Bacillus subtilis]1282.3e-31
cacegi|15896382 Ribosomal protein L4 [Clostridium acetobutylicum]1321.1e-32
ecoligi|16131198 50S ribosomal protein L4 [Escherichia coli K12]982.1e-22

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

Ribosomal_L41Ribosomal protein L4/L1 family15-211120.26.6e-33

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26554464ribosomal protein L4 [Mycoplasma penetrans HF-2] 9441.9e-100
gi|13357792ribosomal protein L4/L1 family [Ureaplasma parvum serovar 6 str. ATCC 27818] 4521.8e-43
gi|31541100RplD [Mycoplasma gallisepticum R] 4404.8e-42
gi|161511519ribosomal protein L4 [Mycoplasma gallisepticum] 4395.7e-42
gi|12045005ribosomal protein L4/L1 family [synthetic Mycoplasma genitalium JCVI-1.0] 3912.3e-36
gi|13507905ribosomal protein L4 [Mycoplasma pneumoniae M129] 3796.2e-35
gi|150392159ribosomal protein L4/L1e [Alkaliphilus metalliredigens QYMF] 3572.3e-32
gi|8331933550S ribosomal protein L4 [Mycoplasma capricolum subsp. capricolum ATCC 27343] 3491.6e-31
gi|5036493950S ribosomal protein L4 [Mesoplasma florum L1] 3472.7e-31
gi|4256126950S RIBOSOMAL PROTEIN L4 [Mycoplasma mycoides subsp. mycoides SC str. PG1] 3454.5e-31


Maintained by Jun Ishikawa