General features

Gene IDMYPE10220
TypeCDS
From1333993
To1333337
Strand-
General namernhB
Definitionribonuclease HII
nt length657
aa length218
m.w.25049.05
COG[L] Replication, recombination and repair


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN118 Hypothetical protein 152512:151802358.1e-04
mmobgi|47459459 ribonuclease HII [Mycoplasma mobile 163K]1453.2e-37
mmycgi|42560965 ribonuclease H II [Mycoplasma mycoides subsp. mycoides SC]1693.6e-44
mgalgi|31544611 Ribonuclease HII [Mycoplasma gallisepticum R]395.3e-05
uuregi|13357958 ribonuclease HII [Ureaplasma urealyticum]387.1e-05
phytgi|39939117 ribonuclease HII Family 2 [Onion yellows phytoplasma]315.7e-03
bsubgi|16078669 ribonuclease H [Bacillus subtilis]1106.6e-26
cacegi|15895039 Ribonuclease HII [Clostridium acetobutylicum]1013.7e-23
ecoligi|16128176 ribonuclease HII [Escherichia coli K12]961.4e-21

*mpne, Mycoplasma pneumoniae; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

RNase_HII1Ribonuclease HII31-210113.95.4e-31

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26554469ribonuclease HII [Mycoplasma penetrans HF-2] 10354.9e-111
gi|83319843ribonuclease HII, putative [Mycoplasma capricolum subsp. capricolum ATCC 27343] 3912.8e-36
gi|42560965ribonuclease H II [Mycoplasma mycoides subsp. mycoides SC str. PG1] 3894.0e-36
gi|110004283putative ribonuclease h II protein [Spiroplasma citri] 3617.5e-33
gi|50365354Ribonuclease HII, primer excision [Mesoplasma florum L1] 3491.8e-31
gi|56964049ribonuclease HII [Bacillus clausii KSM-K16] 3366.1e-30
gi|146297153Ribonuclease H [Caldicellulosiruptor saccharolyticus DSM 8903] 3366.4e-30
gi|57234417ribonuclease HII [Dehalococcoides ethenogenes 195] 3341.1e-29
gi|47459459ribonuclease HII [Mycoplasma mobile 163K] 3321.9e-29
gi|23098995ribonuclease H [Oceanobacillus iheyensis HTE831] 3284.6e-29


Maintained by Jun Ishikawa