General features

Gene IDMYPE10240
TypeCDS
From1337958
To1334575
Strand-
General name
Definitionpredicted protein-export membrane protein SecD
nt length3384
aa length1127
m.w.124216.36
COG[N] Cell motility


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN396 Hypothetical protein 476466:473551722.3e-14
mgengi|12045133 conserved hypothetical protein [Mycoplasma genitalium]791.9e-16
mpulgi|15829130 PROTEIN-EXPORT MEMBRANE PROTEIN SECD [Mycoplasma pulmonis]917.8e-20
mmobgi|47459107 secD- and secF-like type II secretion system protein [Mycoplasma mobile 163K]853.5e-18
mgalgi|31544392 conserved hypothetical [Mycoplasma gallisepticum R]1001.7e-22
uuregi|13358052 unique hypothetical membrane lipoprotein [Ureaplasma urealyticum]1154.0e-27
phytgi|39938752 conserved hypothetical protein [Onion yellows phytoplasma]331.7e-02
bsubgi|16081162 Preprotein translocase, subunits D and F [Bacillus subtilis]599.3e-10
cacegi|15895546 Preprotein translocase subunits SecD [Clostridium acetobutylicum]712.2e-13
ecoligi|16128393 protein export protein SecD [Escherichia coli K12]408.7e-04

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

SecD_SecF1Protein export membrane protein556-754-100.90.062

BCCT1BCCT family transporter600-953-447.50.091

Candida_ALS1Candida agglutinin-like protein (ALS)142-591-226.80.18

Trep_Strep1Hypothetical bacterial integral membr904-1066-98.80.25

Competence1Competence protein589-806-91.20.25

Cyto_ox_21Cytochrome oxidase subunit II700-1097-233.70.38

DUF6061Protein of unknown function, DUF606705-864-70.30.42

Acyl_transf_31Acyltransferase family699-1011-108.20.47

Sugar_tr1Sugar (and other) transporter421-966-202.10.48

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26554471predicted protein-export membrane protein SecD [Mycoplasma penetrans HF-2] 45630.0e+00
gi|85706263Protein-export membrane protein secD [Roseovarius sp. 217] 1833.7e-11
gi|167462402SecDF [Paenibacillus larvae subsp. larvae BRL-230010] 1781.2e-10
gi|31544392conserved hypothetical protein [Mycoplasma gallisepticum R] 1753.2e-10
gi|188568937putative lipoprotein [Ureaplasma urealyticum serovar 2] 1734.7e-10
gi|171920861putative membrane protein [Ureaplasma urealyticum serovar 9 str. ATCC 33175] 1734.8e-10
gi|167760771hypothetical protein CLOSCI_03156 [Clostridium scindens ATCC 35704] 1725.6e-10
gi|15643623protein-export membrane protein SecD [Thermotoga sp. RQ2] 1725.9e-10
gi|188592754putative lipoprotein [Ureaplasma urealyticum serovar 10] 1726.6e-10
gi|195867520putative membrane protein [Ureaplasma urealyticum serovar 9 str. ATCC 33175] 1718.0e-10


Maintained by Jun Ishikawa