General features

Gene IDMYPE10270
TypeCDS
From1341724
To1341227
Strand-
General name
Definitionputative enzyme of deoxy-xylulose pathway YgbB, similar to YacN of Bacillus subtilis
nt length498
aa length165
m.w.19019.92
COG[I] Lipid metabolism


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mgalgi|31544228 conserved hypothetical [Mycoplasma gallisepticum R]1222.4e-30
bsubgi|16077159 similar to hypothetical proteins [Bacillus subtilis]806.2e-17
cacegi|15893725 Putative enzyme of deoxyxylulose pathway (terpenoid biosinthesis), YgbB family, similar to yacN B.subtilis [Clostridium acetobutylicum]821.2e-17
ecoligi|16130653 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Escherichia coli K12]774.5e-16

*mgal, Mycoplasma gallisepticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

YgbB1YgbB family16-165171.32.9e-48

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26554474putative enzyme of deoxy-xylulose pathway YgbB [Mycoplasma penetrans HF-2] 6974.4e-72
gi|1163293072-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Leptospira borgpetersenii... 2682.5e-22
gi|31544228conserved hypothetical protein [Mycoplasma gallisepticum R] 2639.0e-22
gi|456565082-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Leptospira interrogans se... 2484.8e-20
gi|24216290ygbB family protein [Leptospira interrogans serovar Lai str. 56601] 2475.9e-20
gi|850006672-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplast precursor, pu... 2404.3e-19
gi|1197741762-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Shewanella amazonensis SB... 2361.2e-18
gi|1245465982C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Shewanella putrefaciens 20... 2351.4e-18
gi|564598602C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Idiomarina loihiensis L2TR... 2351.5e-18
gi|243749472C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Shewanella oneidensis MR-1... 2351.6e-18


Maintained by Jun Ishikawa