General features

Gene IDMYPE10350
TypeCDS
From1352425
To1351913
Strand-
General namerpoE
DefinitionDNA-directed RNA polymerase subunit delta
nt length513
aa length170
m.w.19589.65
COG[K] Transcription


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN024 rpoE Probable DNA-directed RNA polymerase delta subunit 29804:30244646.7e-13
mgengi|12044872 DNA-directed RNA polymerase, subunit delta (rpoE) [Mycoplasma genitalium]671.0e-13
mgalgi|31544864 RpoE [Mycoplasma gallisepticum R]692.6e-14
uuregi|13358162 DNA-directed RNA polymerase delta subunit [Ureaplasma urealyticum]892.5e-20
bsubgi|16080769 RNA polymerase (delta subunit) [Bacillus subtilis]621.4e-11

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

RNA_pol_delta1DNA-directed RNA polymerase delta subun1-16345.91.5e-10

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26554482DNA-directed RNA polymerase subunit delta [Mycoplasma penetrans HF-2] 5139.6e-51
gi|13358162DNA-directed RNA polymerase, delta subunit [Ureaplasma parvum serovar 6 str. ATC... 1311.9e-06
gi|31544864RpoE [Mycoplasma gallisepticum R] 1212.6e-05
gi|188524216DNA-directed RNA polymerase, delta subunit [Ureaplasma urealyticum serovar 12 st... 1195.3e-05
gi|171920651DNA-directed RNA polymerase, delta subunit [Ureaplasma urealyticum serovar 9 str... 1185.8e-05
gi|12044872DNA-directed RNA polymerase, delta subunit [synthetic Mycoplasma genitalium JCVI... 1186.4e-05
gi|13507763DNA-directed RNA polymerase delta subunit [Mycoplasma pneumoniae M129] 1087.8e-04
gi|13959674Probable DNA-directed RNA polymerase subunit delta (RNAP delta factor) 1088.8e-04
gi|188039702DNA-directed RNA polymerase, delta subunit [Ureaplasma urealyticum serovar 8] 1071.1e-03
gi|194016216DNA-directed RNA polymerase, delta subunit [Bacillus pumilus ATCC 7061] 971.5e-02


Maintained by Jun Ishikawa