General features

Gene IDMYPE1150
TypeCDS
From142348
To142917
Strand+
General namessb
Definitionsingle-strand DNA binding protein
nt length570
aa length189
m.w.21421.37
COG[L] Replication, recombination and repair


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN229 ssb Single-strand binding protein 280430:280930485.8e-08
mgengi|12044943 single-stranded DNA-binding protein (ssb) [Mycoplasma genitalium]484.4e-08
mpulgi|15829081 SINGLE-STRAND BINDING PROTEIN (SSB) (HELIX-DESTABILIZING PROTEIN) [Mycoplasma pulmonis]762.4e-16
mmobgi|47459061 single strand binding protein [Mycoplasma mobile 163K]847.3e-19
mmycgi|42560586 Single-strand binding protein [Mycoplasma mycoides subsp. mycoides SC]711.1e-14
mgalgi|31544818 Ssb [Mycoplasma gallisepticum R]601.8e-11
uuregi|13358117 single-strand binding protein [Ureaplasma urealyticum]992.8e-23
phytgi|39939141 single-stranded DNA-binding protein [Onion yellows phytoplasma]617.2e-12
bsubgi|16081142 single-strand DNA-binding protein [Bacillus subtilis]807.7e-17
cacegi|15896954 Single strand DNA binding protein, SSB [Clostridium acetobutylicum]721.5e-14
ecoligi|16131885 single-strand DNA-binding protein [Escherichia coli K12]582.0e-10

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

SSB1Single-strand binding protein family1-9883.95.5e-22

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26553569single-strand DNA binding protein [Mycoplasma penetrans HF-2] 7971.4e-83
gi|56965863single-strand DNA-binding protein SSB [Bacillus clausii KSM-K16] 1992.9e-14
gi|16801465lin2402 [Listeria innocua] 1968.2e-14
gi|89897781single-strand binding protein [Desulfitobacterium hafniense DCB-2] 1941.1e-13
gi|166992782single-strand DNA-binding protein [Bacillus cereus AH820] 1941.3e-13
gi|196046035single-stranded DNA-binding protein [Bacillus cereus 03BB108] 1941.4e-13
gi|169825431Single-stranded DNA-binding protein (SSB) (Helix-destabilizing protein) [Lysinib... 1931.5e-13
gi|42781293single-stranded DNA-binding protein [Bacillus cereus ATCC 10987] 1931.6e-13
gi|56421726single-strand DNA-binding protein [Geobacillus kaustophilus HTA426] 1931.7e-13
gi|30262185single-stranded DNA-binding protein [Bacillus cereus NVH0597-99] 1931.8e-13


Maintained by Jun Ishikawa