General features

Gene IDMYPE1190
TypeCDS
From145140
To146075
Strand+
General namenfo
Definitionendonuclease IV
nt length936
aa length311
m.w.35337.47
COG[L] Replication, recombination and repair


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN328 nfo Probable endonuclease IV 386734:3875942225.7e-60
mgengi|12045090 endonuclease IV, putative [Mycoplasma genitalium]2117.6e-57
mpulgi|15829092 ENDONUCLEASE IV (ENDODEOXYRIBONUCLEASE IV) [Mycoplasma pulmonis]2096.0e-56
mmobgi|47459383 endonuclease IV [Mycoplasma mobile 163K]2111.0e-56
mmycgi|42560664 endodeoxyribonuclease IV [Mycoplasma mycoides subsp. mycoides SC]2242.0e-60
mgalgi|31544574 Nfo [Mycoplasma gallisepticum R]2441.0e-66
uuregi|13357866 endonuclease IV [Ureaplasma urealyticum]2654.3e-73
phytgi|39938940 endonuclease IV [Onion yellows phytoplasma]2263.2e-61
bsubgi|16079568 similar to endonuclease IV [Bacillus subtilis]2406.8e-65
cacegi|15894910 Endonuclease IV [Clostridium acetobutylicum]546.5e-09
ecoligi|16130097 endonuclease IV [Escherichia coli K12]1516.1e-38

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

AP_endonuc_21Xylose isomerase-like TIM barrel46-265173.27.3e-49

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26553573endonuclease IV [Mycoplasma penetrans HF-2] 15913.7e-175
gi|39931147Probable endonuclease 4 (Endonuclease IV) (Endodeoxyribonuclease IV) 14694.8e-161
gi|162447345endodeoxyribonuclease IV [Acholeplasma laidlawii PG-8A] 6872.0e-70
gi|188568606apurinic endonuclease (APN1) [Ureaplasma urealyticum serovar 2] 6541.6e-66
gi|171920987apurinic endonuclease Apn1 [Ureaplasma urealyticum serovar 9 str. ATCC 33175] 6513.2e-66
gi|169351092hypothetical protein CLOSPI_01871 [Clostridium spiroforme DSM 1552] 6461.4e-65
gi|167755661hypothetical protein CLORAM_01176 [Clostridium ramosum DSM 1402] 6423.5e-65
gi|13357866endonuclease IV [Ureaplasma parvum serovar 3 str. ATCC 700970] 6405.8e-65
gi|169836036endonuclease IV [candidate division TM7 single-cell isolate TM7a] 6397.9e-65
gi|167971869apurinic endonuclease (APN1) [Ureaplasma parvum serovar 6 str. ATCC 27818] 6398.0e-65


Maintained by Jun Ishikawa