General features

Gene IDMYPE130
TypeCDS
From16343
To15438
Strand-
General name
Definitionpseudouridine synthase
nt length906
aa length301
m.w.35769.74
COG[J] Translation, ribosomal structure and biogenesis


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mgengi|12045231 conserved hypothetical protein [Mycoplasma genitalium]1263.1e-31
mpulgi|15828588 RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE C (PSEUDOURIDYLATE SYNTHASE) (URACIL HYDROLYASE) [Mycoplasma pulmonis]1081.4e-25
mmobgi|47459310 ribosomal large subunit pseudouridine synthase C [Mycoplasma mobile 163K]995.3e-23
mmycgi|42561291 RNA pseudouridylate synthase [Mycoplasma mycoides subsp. mycoides SC]1411.2e-35
mgalgi|31544701 RluA [Mycoplasma gallisepticum R]1803.0e-47
uuregi|13357670 pseudouridine synthase (uracil hydrolase) [Ureaplasma urealyticum]2189.9e-59
cacegi|15894302 Pseudouridylate synthase [Clostridium acetobutylicum]1353.6e-33

*mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; cace, Clostridium acetobutylicum;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

PseudoU_synth_21RNA pseudouridylate synthase91-246138.03e-38

S41S4 domain13-5913.10.05

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26553465pseudouridine synthase [Mycoplasma penetrans HF-2] 12957.6e-141
gi|160934208hypothetical protein CLOLEP_03079 [Clostridium leptum DSM 753] 4802.1e-46
gi|167771608hypothetical protein ANACOL_02980 [Anaerotruncus colihominis DSM 17241] 4632.0e-44
gi|13357670pseudouridine synthase [Ureaplasma parvum serovar 6 str. ATCC 27818] 4443.7e-42
gi|185178732pseudouridine synthase [Ureaplasma urealyticum serovar 11 str. ATCC 33695] 4327.7e-41
gi|171920745pseudouridine synthase [Ureaplasma urealyticum serovar 9 str. ATCC 33175] 4327.8e-41
gi|167750591hypothetical protein EUBSIR_01567 [Eubacterium siraeum DSM 15702] 4141.1e-38
gi|160915826hypothetical protein EUBDOL_01842 [Eubacterium dolichum DSM 3991] 4076.3e-38
gi|154498138hypothetical protein BACCAP_02119 [Bacteroides capillosus ATCC 29799] 3971.0e-36
gi|31544701RluA [Mycoplasma gallisepticum R] 3781.4e-34


Maintained by Jun Ishikawa