General features

Gene IDMYPE1310
TypeCDS
From157719
To156823
Strand-
General namerluB
Definitionpseudouridine synthase
nt length897
aa length298
m.w.34819.21
COG[J] Translation, ribosomal structure and biogenesis


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN292 yceC Hypothetical pseudouridine synthase 349804:3488751693.2e-44
mgengi|12045061 sfhB protein, putative [Mycoplasma genitalium]1571.6e-40
mpulgi|15828769 RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE D (PSEUDOURIDYLATE SYNTHASE) (URACIL HYDROLYASE) [Mycoplasma pulmonis]1981.0e-52
mmobgi|47459161 ribosomal large subunit pseudouridine synthase D [Mycoplasma mobile 163K]1541.8e-39
mmycgi|42561113 ribosomal large subunit pseudouridylate synthase D [Mycoplasma mycoides subsp. mycoides SC]1963.2e-52
mgalgi|31544413 RluA [Mycoplasma gallisepticum R]1624.8e-42
uuregi|13357873 pseudouridine synthase (uracil hydrolase) [Ureaplasma urealyticum]2032.5e-54
phytgi|39938617 pseudouridylate synthases [Onion yellows phytoplasma]1532.5e-39
bsubgi|16078610 alternate gene name: ylmL~similar to hypothetical proteins [Bacillus subtilis]1353.8e-33
cacegi|15895383 Predicted pseudouridylate synthase, YLYB B.subtilis ortholog [Clostridium acetobutylicum]1445.9e-36
ecoligi|16130515 23S rRNA pseudouridine synthase [Escherichia coli K12]1371.1e-33

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

PseudoU_synth_21RNA pseudouridylate synthase80-237150.74.6e-42

S41S4 domain5-5147.45.7e-11

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26553585pseudouridine synthase [Mycoplasma penetrans HF-2] 13502.6e-147
gi|13357873pseudouridine synthase (uracil hydrolase) [Ureaplasma parvum serovar 3 str. ATCC... 4507.2e-43
gi|167971859pseudouridylate synthase, 23S RNA-specific [Ureaplasma parvum serovar 6 str. ATC... 4498.4e-43
gi|15828769RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE D (PSEUDOURIDYLATE SYNTHASE) (URA... 4462.0e-42
gi|42561113ribosomal large subunit pseudouridylate synthase D [Mycoplasma mycoides subsp. m... 4353.9e-41
gi|167925304ribosomal large subunit pseudouridylate synthase D [Mycoplasma mycoides subsp. m... 4301.2e-40
gi|5036520523S rRNA/tRNA pseudouridine synthase [Mesoplasma florum L1] 4239.0e-40
gi|171920977pseudouridine synthase, RluA family [Ureaplasma urealyticum serovar 9 str. ATCC ... 4174.3e-39
gi|83319260ribosomal large subunit pseudouridine synthase, RluA family [Mycoplasma capricol... 4174.3e-39
gi|164687826hypothetical protein CLOBAR_01470 [Clostridium bartlettii DSM 16795] 4131.3e-38


Maintained by Jun Ishikawa