General features

Gene IDMYPE1720
TypeCDS
From215896
To216741
Strand+
General name
Definitiontranscriptional regulator RpiR family
nt length846
aa length281
m.w.32204.86
COG[K] Transcription


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpulgi|15828838 unknown; predicted coding region [Mycoplasma pulmonis]551.3e-09
mmycgi|42560799 Transcription regulator gntR [Mycoplasma mycoides subsp. mycoides SC]828.2e-18
bsubgi|16077237 similar to hypothetical proteins [Bacillus subtilis]753.3e-15
cacegi|15893484 Transcriptional regulator, RpiR family [Clostridium acetobutylicum]752.4e-15
ecoligi|16130486 putative transport protein (ABC superfamily, membrane) [Escherichia coli K12]762.2e-15

*mpul, Mycoplasma pulmonis; mmyc, Mycoplasma mycoides; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

SIS1SIS domain124-25232.22.1e-06

HTH_61Helix-turn-helix domain, rpiR family1-106-3.20.002

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26553625transcriptional regulator [Mycoplasma penetrans HF-2] 11101.8e-119
gi|110005244hypothetical transcriptional regulator with helix-turn-helix domain transcriptio... 3287.9e-29
gi|50365456putative transcriptional regulator [Mesoplasma florum L1] 2095.8e-15
gi|110004572hypothetical transmembrane protein [Spiroplasma citri] 2078.0e-15
gi|54020041conserved hypothetical protein [Mycoplasma hyopneumoniae 232] 2032.4e-14
gi|144575361transcriptional regulator [Mycoplasma hyopneumoniae 7448] 2032.4e-14
gi|72080618transcriptional regulator [Mycoplasma hyopneumoniae 7448] 2032.4e-14
gi|144227548putative transcriptional regulator [Mycoplasma hyopneumoniae J] 2023.3e-14
gi|71893627putative transcriptional regulator [Mycoplasma hyopneumoniae J] 2023.3e-14
gi|110005301hypothetical transmembrane protein [Spiroplasma citri] 1988.9e-14


Maintained by Jun Ishikawa