General features

Gene IDMYPE1840
TypeCDS
From231463
To233568
Strand+
General nameligA
DefinitionNAD-dependent DNA ligase
nt length2106
aa length701
m.w.80829.36
COG[L] Replication, recombination and repair


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN357 lig DNA ligase 427511:4255355772.3e-166
mgengi|12045108 DNA ligase [Mycoplasma genitalium]5394.0e-155
mpulgi|15828860 DNA LIGASE (POLYDEOXYRIBONUCLEOTIDE SYNTHASE [NAD+]) [Mycoplasma pulmonis]3704.0e-104
mmobgi|47459030 NAD(+)-dependent DNA ligase [Mycoplasma mobile 163K]4525.0e-129
mmycgi|42561289 DNA ligase [Mycoplasma mycoides subsp. mycoides SC]5363.5e-154
mgalgi|31544904 Lig [Mycoplasma gallisepticum R]5204.2e-149
uuregi|13357678 DNA ligase [Ureaplasma urealyticum]5963.6e-172
phytgi|39938924 NAD-dependent DNA ligase [Onion yellows phytoplasma]4687.2e-134
bsubgi|16077730 similar to DNA ligase [Bacillus subtilis]5248.0e-150
cacegi|15895931 NAD-dependent DNA ligase [Clostridium acetobutylicum]4146.4e-117
ecoligi|16130337 DNA ligase [Escherichia coli K12]4101.1e-115

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

DNA_ligase_aden1NAD-dependent DNA ligase adenylation20-329518.39.8e-153

DNA_ligase_OB1NAD-dependent DNA ligase OB-fold doma331-412130.65.1e-36

DNA_ligase_ZBD1NAD-dependent DNA ligase C4 zinc fing418-44445.62e-10

BRCT1BRCA1 C Terminus (BRCT) domain626-70134.06.2e-07

HHH1Helix-hairpin-helix motif564-59315.00.075

Sec8_exocyst1Sec8 exocyst complex component specif438-586-48.00.31

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26553637NAD-dependent DNA ligase [Mycoplasma penetrans HF-2] 33440.0e+00
gi|13508096DNA ligase [Mycoplasma pneumoniae M129] 14701.0e-160
gi|188524111DNA ligase, NAD-dependent [Ureaplasma urealyticum serovar 12 str. ATCC 33696] 14233.4e-155
gi|195867759DNA ligase, NAD-dependent [Ureaplasma urealyticum serovar 9 str. ATCC 33175] 14223.8e-155
gi|185178794DNA ligase, NAD-dependent [Ureaplasma urealyticum serovar 11 str. ATCC 33695] 14181.1e-154
gi|188568725DNA ligase, NAD-dependent [Ureaplasma urealyticum serovar 2] 14171.5e-154
gi|171920530DNA ligase, NAD-dependent [Ureaplasma urealyticum serovar 13 str. ATCC 33698] 14135.0e-154
gi|171920195DNA ligase, NAD-dependent [Ureaplasma parvum serovar 1 str. ATCC 27813] 14101.2e-153
gi|13357678DNA ligase, NAD-dependent [Ureaplasma parvum serovar 14 str. ATCC 33697] 14091.4e-153
gi|186701986DNA ligase, NAD-dependent [Ureaplasma parvum serovar 6 str. ATCC 27818] 14063.3e-153


Maintained by Jun Ishikawa