General features

Gene IDMYPE1980
TypeCDS
From249228
To252200
Strand+
General namednaE
DefinitionDNA polymerase III subunit alpha
nt length2973
aa length990
m.w.113771.58
COG[L] Replication, recombination and repair


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN378 dnaE DNA polymerase III alpha subunit 453650:4562684512.8e-128
mgengi|12045116 DNA polymerase III, subunit alpha (polC-2) [Mycoplasma genitalium]4672.8e-133
mpulgi|15829190 DNA POLYMERASE III, ALPHA CHAIN [Mycoplasma pulmonis]4765.8e-136
mmobgi|47459322 DNA polymerase III alpha subunit [Mycoplasma mobile 163K]5227.5e-150
mmycgi|42561210 DNA polymerase III alpha chain [Mycoplasma mycoides subsp. mycoides SC]5973.2e-172
mgalgi|31544436 DnaE [Mycoplasma gallisepticum R]6251.6e-02
uuregi|13357977 DNA polymerase III alpha chain 2 [Ureaplasma urealyticum]7632.1e-02
phytgi|39939077 DNA polymerase III alpha subunit [Onion yellows phytoplasma]2767.5e-76
bsubgi|16079975 DNA polymerase III (alpha subunit) [Bacillus subtilis]5501.5e-157
cacegi|15893807 DNA polimerase III, alpha chain (dnaE) [Clostridium acetobutylicum]5001.7e-142
ecoligi|16128177 DNA polymerase III subunit alpha [Escherichia coli K12]4318.9e-122

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

DNA_pol3_alpha1Bacterial DNA polymerase III alpha su190-666824.66.3e-245

PHP1PHP domain14-2007.10.001

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26553651DNA polymerase III subunit alpha [Mycoplasma penetrans HF-2] 46020.0e+00
gi|185178880DNA polymerase III subunit alpha [Ureaplasma urealyticum serovar 9 str. ATCC 331... 17950.0e+00
gi|188524382DNA polymerase III subunit alpha [Ureaplasma urealyticum serovar 12 str. ATCC 33... 17930.0e+00
gi|171920935DNA polymerase III subunit alpha [Ureaplasma urealyticum serovar 13 str. ATCC 33... 17930.0e+00
gi|188592816DNA polymerase III subunit alpha [Ureaplasma urealyticum serovar 10] 17920.0e+00
gi|188024087DNA polymerase III subunit alpha [Ureaplasma urealyticum serovar 7 str. ATCC 278... 17910.0e+00
gi|13357977DNA polymerase III subunit alpha [Ureaplasma parvum serovar 6 str. ATCC 27818] 17650.0e+00
gi|171920472DNA polymerase III subunit alpha [Ureaplasma parvum serovar 1 str. ATCC 27813] 17590.0e+00
gi|31544436DnaE [Mycoplasma gallisepticum R] 14772.4e-161
gi|16079975DNA polymerase III (alpha subunit) [Bacillus subtilis subsp. subtilis str. 168] 14234.9e-155


Maintained by Jun Ishikawa