General features

Gene IDMYPE20
TypeCDS
From1450
To2586
Strand+
General namednaN
DefinitionDNA polymerase III subunit beta
nt length1137
aa length378
m.w.42593.68
COG[L] Replication, recombination and repair


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN001 dnaN DNA polymerase III, beta chain 692:18341572.8e-40
mgengi|12044851 DNA polymerase III, subunit beta (dnaN) [Mycoplasma genitalium]1456.4e-37
mpulgi|15828473 DNA POLYMERASE III, BETA CHAIN [Mycoplasma pulmonis]821.4e-17
mmobgi|47458837 DNA polymerase III beta chain [Mycoplasma mobile 163K]1302.8e-32
mmycgi|42560562 DNA POLYMERASE III, BETA CHAIN [Mycoplasma mycoides subsp. mycoides SC]1366.9e-34
mgalgi|31544930 DnaN [Mycoplasma gallisepticum R]1003.0e-23
uuregi|13357635 DNA pol III beta chain [Ureaplasma urealyticum]2011.7e-53
phytgi|39938488 DNA polymerase III beta subunit [Onion yellows phytoplasma]1141.7e-27
bsubgi|16077070 DNA polymerase III (beta subunit) [Bacillus subtilis]1393.5e-34
cacegi|15893300 DNA polymerase III beta subunit [Clostridium acetobutylicum]1292.6e-31
ecoligi|16131569 DNA polymerase III subunit beta [Escherichia coli K12]785.0e-16

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

DNA_pol3_beta_31DNA polymerase III beta subunit, C-te255-37776.21.2e-19

DNA_pol3_beta1DNA polymerase III beta subunit, N-te7-12947.07.5e-11

DNA_pol3_beta_21DNA polymerase III beta subunit, cent139-25318.15.1e-07

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26553454DNA polymerase III subunit beta [Mycoplasma penetrans HF-2] 15728.0e-173
gi|13357635DNA polymerase III, beta subunit [Ureaplasma parvum serovar 6 str. ATCC 27818] 4132.0e-38
gi|110003909putative dna polymerase III, beta chain protein [Spiroplasma citri] 3602.6e-32
gi|29374663DNA polymerase III, beta subunit [Enterococcus faecalis V583] 3461.0e-30
gi|73661311DNA polymerase III beta subunit [Staphylococcus saprophyticus subsp. saprophytic... 3291.1e-28
gi|70725003DNA polymerase III beta chain, sliding clamp subunit [Staphylococcus haemolyticu... 3244.1e-28
gi|69246707DNA polymerase III, beta chain [Enterococcus faecium DO] 3235.3e-28
gi|461954DnaN protein [Spiroplasma citri] 3226.2e-28
gi|15922992DNA-directed DNA polymerase beta subunit [Staphylococcus aureus subsp. aureus US... 3219.4e-28
gi|116332683DNA polymerase III, beta subunit [Lactobacillus brevis ATCC 367] 3191.6e-27


Maintained by Jun Ishikawa