General features

Gene IDMYPE2110
TypeCDS
From264155
To265600
Strand+
General namegatB
Definitionglutamyl-tRNA amidotransferase subunit B
nt length1446
aa length481
m.w.55592.60
COG[J] Translation, ribosomal structure and biogenesis


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN238 PET112 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B 290256:2916923787.9e-107
mgengi|12044952 Glu-tRNA amidotransferase, subunit B (gatB) [Mycoplasma genitalium]3871.3e-109
mpulgi|15828672 conserved hypothetical protein [Mycoplasma pulmonis]4002.4e-113
mmobgi|47459211 glutamyl-tRNA amidotransferase subunit B [Mycoplasma mobile 163K]3832.5e-108
mmycgi|42561286 glutamyl-tRNA (Gln) amidotransferase subunit B [Mycoplasma mycoides subsp. mycoides SC]3711.3e-104
mgalgi|31544810 GatB [Mycoplasma gallisepticum R]4602.6e-131
uuregi|13358108 glutamyl-tRNA amidotransferase subunit B [Ureaplasma urealyticum]4071.2e-115
bsubgi|16077737 similar to pet112-like protein [Bacillus subtilis]2454.7e-66
cacegi|15895927 Glu-tRNAGln amidotransferase subunit B [Clostridium acetobutylicum]2622.7e-71

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

GatB_N1PET112 family, N terminal region7-242437.52.1e-128

GatB_Yqey1GatB domain328-477167.05.4e-47

GatB1PET112 family, C terminal region259-32610.90.00053

NTase_sub_bind1Nucleotidyltransferase substrate bind350-443-61.10.21

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26553664glutamyl-tRNA amidotransferase subunit B [Mycoplasma penetrans HF-2] 21980.0e+00
gi|31544810GatB [Mycoplasma gallisepticum R] 10701.7e-114
gi|185179105glutamyl-tRNA(Gln) amidotransferase, subunit B [Ureaplasma urealyticum serovar 1... 9958.8e-106
gi|188592700glutamyl-tRNA(Gln)/aspartyl-tRNA(Asn) amidotransferase, B subunit [Ureaplasma ur... 9941.0e-105
gi|171920667glutamyl-tRNA(Gln) amidotransferase, subunit B [Ureaplasma urealyticum serovar 1... 9941.1e-105
gi|195867941glutamyl-tRNA(Gln) amidotransferase, subunit B [Ureaplasma urealyticum serovar 9... 9931.3e-105
gi|171920202glutamyl-tRNA(Gln) amidotransferase, subunit B [Ureaplasma parvum serovar 1 str.... 9671.6e-102
gi|186701818glutamyl-tRNA(Gln) amidotransferase, subunit B [Ureaplasma parvum serovar 6 str.... 9591.4e-101
gi|183508464glutamyl-tRNA(Gln) amidotransferase, subunit B [Ureaplasma parvum serovar 14 str... 9591.4e-101
gi|13358108glutamyl-tRNA(Gln)/aspartyl-tRNA(Asn) amidotransferase, B subunit [Ureaplasma pa... 9591.4e-101


Maintained by Jun Ishikawa