General features

Gene IDMYPE2200
TypeCDS
From278084
To276441
Strand-
General name
DefinitionABC transporter ATP-binding protein
nt length1644
aa length547
m.w.63272.63
COG[Q] Secondary metabolites biosynthesis, transport and catabolism


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

ABC_tran1ABC transporter369-547109.31.3e-29

ABC_membrane1ABC transporter transmembrane region16-304-34.80.048

MMR_HSR11GTPase of unknown function370-535-25.50.23

AAA1ATPase family associated with various371-526-48.90.5

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26553673ABC transporter ATP-binding protein [Mycoplasma penetrans HF-2] 21320.0e+00
gi|42519456ABC transporter ATPase and permease components [Lactobacillus johnsonii NCC 533] 4241.5e-39
gi|55821917ABC-type multidrug transport system, ATPase and permease component [Streptococcu... 3936.0e-36
gi|55823835ABC transporter ATP binding/permease protein, truncated [Streptococcus thermophi... 3792.6e-34
gi|191636881ABC transporter ATP-binding/membrane spanning permease-possible multidrug resist... 3668.6e-33
gi|116493629ABC-type multidrug transport system, ATPase and permease component [Lactobacillu... 3651.3e-32
gi|163790425ABC transporter ATP-binding/membrane spanning permease - possible multidrug resi... 3443.0e-30
gi|26553674ABC transporter ATP-binding protein [Mycoplasma penetrans HF-2] 3433.6e-30
gi|50364984unknown substrate ABC transporter permease component [Mesoplasma florum L1] 3408.2e-30
gi|42518111ABC transporter ATPase and permease components [Lactobacillus johnsonii NCC 533] 3327.5e-29


Maintained by Jun Ishikawa