General features

Gene IDMYPE230
TypeCDS
From34086
To34802
Strand+
General namespoU
DefinitionrRNA methylase
nt length717
aa length238
m.w.27243.40
COG[J] Translation, ribosomal structure and biogenesis


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN355 yacO Hypothetical tRNA/rRNA methyltransferase MG252 homolog 424238:4235101471.3e-37
mgengi|12045106 rRNA methylase, putative [Mycoplasma genitalium]1554.6e-40
mpulgi|15828649 TRNA/RRNA METHYLTRANSFERASE [Mycoplasma pulmonis]1371.6e-34
mmobgi|47458982 spoU class tRNA/rRNA methylase [Mycoplasma mobile 163K]1001.8e-23
mmycgi|42561476 rRNA Methylase [Mycoplasma mycoides subsp. mycoides SC]1419.1e-36
mgalgi|31544882 SpoU [Mycoplasma gallisepticum R]1441.0e-36
uuregi|13357681 rRNA methylase [Ureaplasma urealyticum]1632.1e-42
bsubgi|16077164 similar to hypothetical proteins [Bacillus subtilis]1005.9e-23
cacegi|15896402 RRNA methylase, YACO B.subtilis ortholog [Clostridium acetobutylicum]1313.8e-32
ecoligi|16132002 Gm2251 methyltransferase of 23S rRNA [Escherichia coli K12]961.6e-21

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

SpoU_methylase1SpoU rRNA Methylase family89-232182.98.9e-52

SpoU_sub_bind1RNA 2'-O ribose methyltransferase subs3-6939.21.6e-08

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26553475rRNA methylase [Mycoplasma penetrans HF-2] 10132.3e-108
gi|171920305RNA methyltransferase, TrmH family, group 3 [Ureaplasma urealyticum serovar 11 s... 3483.0e-31
gi|13357681RNA methyltransferase, TrmH family, group 3 [Ureaplasma parvum serovar 14 str. A... 3464.9e-31
gi|12045106RNA methyltransferase, TrmH family, group 3 [synthetic Mycoplasma genitalium JCV... 3431.0e-30
gi|13508094tRNA/rRNA methyltransferase-like protein [Mycoplasma pneumoniae M129] 3421.4e-30
gi|188524104RNA methyltransferase, TrmH family, group 3 [Ureaplasma urealyticum serovar 9 st... 3411.9e-30
gi|186701914RNA methyltransferase, TrmH family, group 3 [Ureaplasma parvum serovar 6 str. AT... 3393.6e-30
gi|31544882SpoU [Mycoplasma gallisepticum R] 3171.3e-27
gi|188584816RNA methyltransferase, TrmH family, group 3 [Natranaerobius thermophilus JW/NM-W... 3081.4e-26
gi|171778431hypothetical protein STRINF_00440 [Streptococcus infantarius subsp. infantarius ... 3009.5e-26


Maintained by Jun Ishikawa