General features

Gene IDMYPE2470
TypeCDS
From304156
To305961
Strand+
General name
DefinitionABC transporter ATP-binding protein, paralog family
nt length1806
aa length601
m.w.67553.92
COG[Q] Secondary metabolites biosynthesis, transport and catabolism


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mmycgi|42560969 ABC transporter, permease and ATP-binding componen [Mycoplasma mycoides subsp. mycoides SC]2291.0e-61
phytgi|39938545 ABC-type multidrug/protein/lipid transport system, ATPase component [Onion yellows phytoplasma]2881.1e-79
bsubgi|16077888 similar to ABC transporter (ATP-binding protein) [Bacillus subtilis]3349.9e-93
cacegi|15896655 ABC-type multidrug/protein/lipid transport system, ATPase component [Clostridium acetobutylicum]5861.0e-168

*mmyc, Mycoplasma mycoides; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

ABC_tran1ABC transporter379-563171.13.1e-48

ABC_membrane1ABC transporter transmembrane region24-303117.06.4e-32

Voltage_CLC1Voltage gated chloride channel36-329-181.50.39

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26553699ABC transporter ATP-binding protein [Mycoplasma penetrans HF-2] 28570.0e+00
gi|160934996hypothetical protein CLOLEP_03872 [Clostridium leptum DSM 753] 16710.0e+00
gi|160879386ABC transporter related [Clostridium phytofermentans ISDg] 16460.0e+00
gi|167772725hypothetical protein ANACOL_04107 [Anaerotruncus colihominis DSM 17241] 16440.0e+00
gi|160941182hypothetical protein CLOBOL_06075 [Clostridium bolteae ATCC BAA-613] 15612.6e-171
gi|125975625ABC transporter related [Clostridium thermocellum DSM 4150] 15272.1e-167
gi|150018129ABC transporter related [Clostridium beijerinckii NCIMB 8052] 15244.9e-167
gi|160894398hypothetical protein CLOL250_01951 [Clostridium sp. L2-50] 15191.9e-166
gi|169351061hypothetical protein CLOSPI_01840 [Clostridium spiroforme DSM 1552] 15182.9e-166
gi|139439301Hypothetical protein COLAER_01759 [Collinsella aerofaciens ATCC 25986] 15147.3e-166


Maintained by Jun Ishikawa