General features

Gene IDMYPE2480
TypeCDS
From305942
To307879
Strand+
General name
DefinitionABC transporter ATP-binding protein
nt length1938
aa length645
m.w.71298.88
COG[Q] Secondary metabolites biosynthesis, transport and catabolism


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mgalgi|31544210 MdlB-like [Mycoplasma gallisepticum R]4081.6e-115
cacegi|15896656 ABC-type multidrug/protein/lipid transport system, ATPase component [Clostridium acetobutylicum]5538.1e-159

*mgal, Mycoplasma gallisepticum; cace, Clostridium acetobutylicum;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

ABC_tran1ABC transporter432-616182.61.1e-51

ABC_membrane1ABC transporter transmembrane region31-329125.12.2e-34

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26553700ABC transporter ATP-binding protein [Mycoplasma penetrans HF-2] 32240.0e+00
gi|167772726hypothetical protein ANACOL_04108 [Anaerotruncus colihominis DSM 17241] 15221.0e-166
gi|154505487hypothetical protein RUMGNA_03024 [Ruminococcus gnavus ATCC 29149] 15093.3e-165
gi|154509304hypothetical protein ACTODO_01829 [Actinomyces odontolyticus ATCC 17982] 15084.4e-165
gi|160879387ABC transporter related [Clostridium phytofermentans ISDg] 15031.5e-164
gi|153811111hypothetical protein RUMOBE_01502 [Ruminococcus obeum ATCC 29174] 14961.1e-163
gi|167765713hypothetical protein CLOSS21_00201 [Clostridium sp. SS2/1] 14923.0e-163
gi|196252551ABC transporter related [Clostridium thermocellum DSM 4150] 14734.3e-161
gi|125975626ABC transporter related protein [Clostridium thermocellum ATCC 27405] 14725.8e-161
gi|166032094hypothetical protein DORFOR_01797 [Dorea formicigenerans ATCC 27755] 14709.3e-161


Maintained by Jun Ishikawa