General features

Gene IDMYPE2530
TypeCDS
From316009
To317346
Strand+
General nameffh
Definitionsignal recognition particle GTPase Ffh
nt length1338
aa length445
m.w.49871.03
COG[N] Cell motility


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN061 ffh Signal recognition particle protein 78977:776254762.6e-136
mgengi|12044898 signal recognition particle protein (ffh) [Mycoplasma genitalium]4561.6e-130
mpulgi|15828813 SIGNAL RECOGNITION PARTICLE PROTEIN (FIFTY-FOUR HOMOLOG) [Mycoplasma pulmonis]4041.2e-114
mmobgi|47459362 signal recognition particle GTPase [Mycoplasma mobile 163K]3988.8e-113
mmycgi|42560958 Signal recognition particle M54 protein [Mycoplasma mycoides subsp. mycoides SC]4071.5e-115
mgalgi|31544492 Ffh [Mycoplasma gallisepticum R]5141.1e-147
uuregi|13357648 signal recognition particle [Ureaplasma urealyticum]5585.0e-161
phytgi|39939164 signal recognition particle GTPase [Onion yellows phytoplasma]2886.2e-80
bsubgi|16078661 signal recognition particle [Bacillus subtilis]3407.5e-95
cacegi|15895031 Signal recognition particle GTPase Ffh [Clostridium acetobutylicum]3491.5e-97
ecoligi|16130531 4.5S-RNP protein, GTP-binding export factor, part of signal recognition particle with 4.5 RNA [Escherichia coli K12]3046.7e-84

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

SRP541SRP54-type protein, GTPase domain100-295350.33.5e-102

SRP_SPB1Signal peptide binding domain326-426137.15.7e-38

SRP54_N1SRP54-type protein, helical bundle do2-8774.53.8e-19

MMR_HSR11GTPase of unknown function101-250-1.70.0014

CbiA1CobQ/CobB/MinD/ParA nucleotide bindin103-287-21.20.0032

AAA1ATPase family associated with various102-312-35.30.032

ResIII1Type III restriction enzyme, res subu38-214-36.80.065

GTP_EFTU1Elongation factor Tu GTP binding doma101-342-95.40.077

Miro1Miro-like protein102-250-15.20.29

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26553705signal recognition particle GTPase [Mycoplasma penetrans HF-2] 19400.0e+00
gi|185178783signal recognition particle protein [Ureaplasma urealyticum serovar 9 str. ATCC ... 13058.4e-142
gi|188024387signal recognition particle protein [Ureaplasma urealyticum serovar 7 str. ATCC ... 13059.0e-142
gi|171920811signal recognition particle protein [Ureaplasma urealyticum serovar 13 str. ATCC... 13059.1e-142
gi|188592563signal recognition particle protein [Ureaplasma urealyticum serovar 10] 13041.2e-141
gi|171920360signal recognition particle protein [Ureaplasma parvum serovar 6 str. ATCC 27818... 13003.0e-141
gi|13357648signal recognition particle protein [Ureaplasma parvum serovar 14 str. ATCC 3369... 12978.0e-141
gi|31544492Ffh [Mycoplasma gallisepticum R] 11921.2e-128
gi|13507800signal recognition particle protein [Mycoplasma pneumoniae M129] 11211.9e-120
gi|12044898signal recognition particle protein [synthetic Mycoplasma genitalium JCVI-1.0] 10737.3e-115


Maintained by Jun Ishikawa