General features

Gene IDMYPE260
TypeCDS
From36106
To37116
Strand+
General name
Definitionribosomal protein L1
nt length1011
aa length336
m.w.36891.33
COG[J] Translation, ribosomal structure and biogenesis


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN220 rplA 50S ribosomal protein L1 272462:2731422087.1e-56
mgengi|12044934 ribosomal protein L1 (rpL1) [Mycoplasma genitalium]2087.0e-56
mpulgi|15828481 50S RIBOSOMAL PROTEIN L1 [Mycoplasma pulmonis]1811.5e-47
mmobgi|47458974 50S ribosomal protein l1 [Mycoplasma mobile 163K]1841.9e-48
mmycgi|42561511 50S ribosomal protein L1 [Mycoplasma mycoides subsp. mycoides SC]1872.9e-49
mgalgi|31544869 RplA [Mycoplasma gallisepticum R]2425.6e-66
uuregi|13358104 ribosomal protein L1 [Ureaplasma urealyticum]2171.5e-58
phytgi|39938743 ribosomal protein L1 [Onion yellows phytoplasma]2025.5e-54
bsubgi|16077171 ribosomal protein L1 (BL1) [Bacillus subtilis]1984.3e-52
cacegi|15896395 Ribosomal protein L1 [Clostridium acetobutylicum]1791.9e-46
ecoligi|16131814 50S ribosomal protein L1 [Escherichia coli K12]1722.8e-44

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

Ribosomal_L11Ribosomal protein L1p/L10e family19-225303.93.3e-88

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26553478ribosomal protein L1 [Mycoplasma penetrans HF-2] 12751.9e-138
gi|31544869RplA [Mycoplasma gallisepticum R] 5385.1e-53
gi|167940697ribosomal protein L1 [Ureaplasma urealyticum serovar 9 str. ATCC 33175] 5001.3e-48
gi|13358104ribosomal protein L1 [Ureaplasma parvum serovar 6 str. ATCC 27818] 4972.9e-48
gi|72163056LSU ribosomal protein L1P [Thermobifida fusca YX] 4821.5e-46
gi|187605173ribosomal protein L1 [Exiguobacterium sp. AT1b] 4784.4e-46
gi|160914583hypothetical protein EUBDOL_00591 [Eubacterium dolichum DSM 3991] 4775.7e-46
gi|1567398250S ribosomal protein L1 [Lactococcus lactis subsp. lactis Il1403] 4731.5e-45
gi|172056128ribosomal protein L1 [Exiguobacterium sibiricum 255-15] 4731.6e-45
gi|13507959ribosomal protein L1 [Mycoplasma pneumoniae M129] 4731.7e-45


Maintained by Jun Ishikawa