General features

Gene IDMYPE2730
TypeCDS
From361202
To359871
Strand-
General name
Definitionserine hydroxymethyl transferase
nt length1332
aa length443
m.w.49537.56
COG[E] Amino acid transport and metabolism


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN576 glyA Serine hydroxymethyltransferase 699905:6986854941.2e-141
mgengi|12045256 serine hydroxymethyltransferase (glyA) [Mycoplasma genitalium]4645.8e-133
mpulgi|15828810 SERINE HYDROXYMETHYLTRANSFERASE (SERINE METHYLASE) (SHMT) [Mycoplasma pulmonis]4162.9e-118
mmobgi|47459306 serine hydroxymethyltransferase [Mycoplasma mobile 163K]4394.5e-125
mmycgi|42561412 glycine hydroxymethyltransferase [Mycoplasma mycoides subsp. mycoides SC]4662.7e-133
mgalgi|31544494 GlyA [Mycoplasma gallisepticum R]5571.1e-160
phytgi|39938667 glycine hydroxymethyltransferase [Onion yellows phytoplasma]4016.5e-114
bsubgi|16080743 serine hydroxymethyltransferase [Bacillus subtilis]4352.9e-123
cacegi|15895532 Glycine hydroxymethyltransferase [Clostridium acetobutylicum]4261.3e-120
ecoligi|16130476 serine hydroxymethyltransferase [Escherichia coli K12]4201.1e-118

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

SHMT1Serine hydroxymethyltransferase31-408723.31.9e-214

Aminotran_1_21Aminotransferase class I and II49-391-102.60.041

Aminotran_51Aminotransferase class-V63-404-212.90.44

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26553727serine hydroxymethyl transferase [Mycoplasma penetrans HF-2] 22620.0e+00
gi|38372373Serine hydroxymethyltransferase (Serine methylase) (SHMT) 21100.0e+00
gi|31544494GlyA [Mycoplasma gallisepticum R] 13855.1e-151
gi|13508315serine hydroxymethyltransferase [Mycoplasma pneumoniae M129] 12932.4e-140
gi|12045256serine hydroxymethyltransferase [synthetic Mycoplasma genitalium JCVI-1.0] 12108.1e-131
gi|160914794hypothetical protein EUBDOL_00801 [Eubacterium dolichum DSM 3991] 12081.7e-130
gi|167924975serine hydroxymethyltransferase [Mycoplasma mycoides subsp. mycoides LC str. GM1... 12018.9e-130
gi|83319931serine hydroxymethyltransferase [Mycoplasma capricolum subsp. capricolum ATCC 27... 11954.8e-129
gi|119513483serine hydroxymethyltransferase [Nodularia spumigena CCY9414] 11902.0e-128
gi|162446933glycine hydroxymethyltransferase [Acholeplasma laidlawii PG-8A] 11892.4e-128


Maintained by Jun Ishikawa