General features

Gene IDMYPE2780
General nameruvB
Definitionholliday junction DNA helicase RuvB
nt length969
aa length322
COG[L] Replication, recombination and repair

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN536 ruvB Holliday junction DNA helicase ruvB 657517:6584402319.7e-63
mgengi|12045219 Holliday junction DNA helicase (ruvB) [Mycoplasma genitalium]2431.4e-66
mpulgi|15829129 HOLLIDAY JUNCTION DNA HELICASE RUVB [Mycoplasma pulmonis]2358.2e-64
mmobgi|47459106 holliday junction DNA helicase RuvB [Mycoplasma mobile 163K]2288.3e-62
mmycgi|42561076 Holliday junction DNA helicase RuvB [Mycoplasma mycoides subsp. mycoides SC]2272.4e-61
mgalgi|31544807 RuvB [Mycoplasma gallisepticum R]2593.2e-71
uuregi|13358011 holliday junction DNA helicase [Ureaplasma urealyticum]2802.3e-77
bsubgi|16081161 Holliday junction resolvasome helicase subunit [Bacillus subtilis]2083.9e-55
cacegi|15895552 Holliday junction specific DNA helicase, subunit ruvB [Clostridium acetobutylicum]2153.0e-57
ecoligi|16129813 Holliday junction DNA helicase RuvB [Escherichia coli K12]1892.8e-49

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result

ModelNo.DescriptionPosition (aa)ScoreE-value

AAA1ATPase family associated with various40-21973.48e-19

RuvB_C1Holliday junction DNA helicase ruvB C-230-30567.83.9e-17

AAA_51ATPase family associated with various40-16614.26.3e-05

RuvB_N1Holliday junction DNA helicase ruvB N-1-397.10.00017

AAA_31ATPase family associated with various40-160-13.10.01

Mg_chelatase1Magnesium chelatase, subunit ChlI37-172-143.30.011

AAA_21ATPase family associated with various39-161-43.90.027

MarR1MarR family238-301-8.80.27

Bac_DnaA1Bacterial dnaA protein10-220-140.10.35

BLAST search result (top 10 hits)

gi|26553732holliday junction DNA helicase [Mycoplasma penetrans HF-2] 14703.7e-161
gi|168338298holliday junction DNA helicase RuvB [Ureaplasma urealyticum serovar 10] 6461.2e-65
gi|167941560holliday junction DNA helicase RuvB [Ureaplasma urealyticum serovar 9 str. ATCC ... 6461.5e-65
gi|167972862holliday junction DNA helicase RuvB [Ureaplasma urealyticum serovar 5 str. ATCC ... 6432.8e-65
gi|13358011holliday junction DNA helicase RuvB [Ureaplasma parvum serovar 14 str. ATCC 3369... 6433.1e-65
gi|31544807RuvB [Mycoplasma gallisepticum R] 6111.7e-61
gi|154148614holliday junction DNA helicase RuvB [Campylobacter hominis ATCC BAA-381] 5895.6e-59
gi|166031913hypothetical protein DORFOR_01614 [Dorea formicigenerans ATCC 27755] 5871.0e-58
gi|160892585hypothetical protein CLOL250_00114 [Clostridium sp. L2-50] 5851.8e-58
gi|153855298hypothetical protein DORLON_02478 [Dorea longicatena DSM 13814] 5823.6e-58

Maintained by Jun Ishikawa