General features

Gene IDMYPE2860
TypeCDS
From374053
To375333
Strand+
General namehisS
Definitionhistidyl-tRNA synthetase
nt length1281
aa length426
m.w.49904.64
COG[J] Translation, ribosomal structure and biogenesis


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN045 hisS Histidyl-tRNA synthetase 53077:543212411.7e-65
mgengi|12044885 histidyl-tRNA synthetase [Mycoplasma genitalium]2862.1e-79
mpulgi|15828804 HISTIDYL-TRNA SYNTHETASE (HISTIDINE--TRNA LIGASE) (HISRS)h) [Mycoplasma pulmonis]2742.2e-75
mmobgi|47459108 histidyl-tRNA synthetase [Mycoplasma mobile 163K]2811.5e-77
mmycgi|42560881 histidine-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC]2997.1e-83
mgalgi|31544388 HisS [Mycoplasma gallisepticum R]3002.3e-83
uuregi|13357845 histidyl-tRNA synthetase [Ureaplasma urealyticum]3601.4e-101
phytgi|39938613 histidyl-tRNA synthetase [Onion yellows phytoplasma]2518.0e-69
bsubgi|16079810 histidyl-tRNA synthetase [Bacillus subtilis]2877.1e-79
cacegi|15895997 Histidyl-tRNA synthetase [Clostridium acetobutylicum]1278.9e-31
ecoligi|16130439 histidyl-tRNA synthetase [Escherichia coli K12]2387.4e-64

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

tRNA-synt_2b1tRNA synthetase class II core domain (19-187138.42.2e-38

HGTP_anticodon1Anticodon binding domain330-42132.81.4e-06

tRNA-synt_2d1tRNA synthetases class II core domain22-327-173.00.06

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26553740histidyl-tRNA synthetase [Mycoplasma penetrans HF-2] 19910.0e+00
gi|13357845histidyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC 27818] 8684.2e-91
gi|171920557histidyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC 33175] 8641.2e-90
gi|69247936Histidyl-tRNA synthetase, class IIa [Enterococcus faecium DO] 8074.3e-84
gi|170017024Histidyl-tRNA synthetase [Leuconostoc citreum KM20] 7851.6e-81
gi|29376493histidyl-tRNA synthetase [Enterococcus faecalis V583] 7841.9e-81
gi|28378623histidine--tRNA ligase [Lactobacillus plantarum WCFS1] 7806.2e-81
gi|116495010Histidyl-tRNA synthetase (Histidine--tRNA ligase) (HisRS) [Lactobacillus casei B... 7761.7e-80
gi|184155308histidyl-tRNA synthase [Lactobacillus fermentum IFO 3956] 7742.9e-80
gi|169350231hypothetical protein CLOSPI_00975 [Clostridium spiroforme DSM 1552] 7733.7e-80


Maintained by Jun Ishikawa