General features

Gene IDMYPE2870
TypeCDS
From375348
To377090
Strand+
General nameaspS
Definitionaspartyl-tRNA synthetase
nt length1743
aa length580
m.w.67118.71
COG[J] Translation, ribosomal structure and biogenesis


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN046 aspS Aspartyl-tRNA synthetase 54293:559664072.0e-115
mgengi|12044886 aspartyl-tRNA synthetase (aspS) [Mycoplasma genitalium]4001.4e-113
mpulgi|15828803 ASPARTYL-TRNA SYNTHETASE (ASPARTATE--TRNA LIGASE) (ASPRS) [Mycoplasma pulmonis]5233.0e-150
mmobgi|47459109 aspartyl-tRNA synthetase [Mycoplasma mobile 163K]5233.2e-150
mmycgi|42560880 aspartate-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC]5372.2e-154
mgalgi|31544389 AspS [Mycoplasma gallisepticum R]5034.3e-144
uuregi|13357846 aspartyl-tRNA synthetase [Ureaplasma urealyticum]6054.8e-175
phytgi|39938614 aspartyl-tRNA synthetase [Onion yellows phytoplasma]4288.8e-122
bsubgi|16079809 aspartyl-tRNA synthetase [Bacillus subtilis]5031.2e-143
cacegi|15895537 Aspartyl-tRNA synthetase [Clostridium acetobutylicum]5031.4e-143
ecoligi|16129819 aspartyl-tRNA synthetase [Escherichia coli K12]4414.8e-125

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

tRNA-synt_21tRNA synthetases class II (D, K and N)119-554704.49.4e-209

tRNA_anti1OB-fold nucleic acid binding domain21-10269.11.6e-17

GAD1GAD domain308-39942.91.3e-09

tRNA-synt_2b1tRNA synthetase class II core domain (G,142-283-36.50.0045

tRNA-synt_2d1tRNA synthetases class II core domain (F120-299-166.20.019

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26553741aspartyl-tRNA synthetase [Mycoplasma penetrans HF-2] 28710.0e+00
gi|171920816aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC 33175] 15641.0e-171
gi|13357846aspartyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC 27818] 15066.2e-165
gi|110004665probable aspartyl-trna synthetase protein [Spiroplasma citri] 14861.1e-162
gi|52081234AspS [Bacillus licheniformis DSM 13] 13982.3e-152
gi|29376492aspartyl-tRNA synthetase [Enterococcus faecalis V583] 13792.9e-150
gi|153854668hypothetical protein DORLON_01916 [Dorea longicatena DSM 13814] 13766.5e-150
gi|51893559aspartyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863] 13768.0e-150
gi|160932387hypothetical protein CLOLEP_01222 [Clostridium leptum DSM 753] 13759.0e-150
gi|56963342aspartyl-tRNA synthetase [Bacillus clausii KSM-K16] 13759.0e-150


Maintained by Jun Ishikawa