General features

Gene IDMYPE30
TypeCDS
From3002
To4951
Strand+
General namegyrB
DefinitionDNA gyrase subunit B
nt length1950
aa length649
m.w.73451.40
COG[L] Replication, recombination and repair


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN003 gyrB DNA gyrase subunit B 2869:48218646.7e-50
mgengi|12044853 DNA gyrase subunit B (gyrB) [Mycoplasma genitalium]8719.5e-57
mpulgi|15829210 DNA GYRASE SUBUNIT B [Mycoplasma pulmonis]7335.8e-48
mmobgi|47458936 DNA gyrase subunit b [Mycoplasma mobile 163K]7341.1e-44
mmycgi|42560566 DNA Gyrase Subunit B [Mycoplasma mycoides subsp. mycoides SC]6533.5e-38
mgalgi|31544928 GyrB [Mycoplasma gallisepticum R]8492.6e-51
uuregi|13357637 DNA topoisomerase - DNA gyrase subunit B [Ureaplasma urealyticum]9117.1e-65
phytgi|39938984 DNA gyrase beta subunit [Onion yellows phytoplasma]6284.7e-01
bsubgi|16077074 DNA gyrase (subunit B) [Bacillus subtilis]7078.6e-41
cacegi|15893304 DNA gyrase (topoisomerase II) B subunit [Clostridium acetobutylicum]6711.7e-43
ecoligi|49176395 DNA gyrase subunit B [Escherichia coli K12]5283.4e-151

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

DNA_gyraseB1DNA gyrase B227-407259.96.2e-75

DNA_gyraseB_C1DNA gyrase B subunit, carboxyl termin572-638171.52.4e-48

HATPase_c1Histidine kinase-, DNA gyrase B-, and35-181112.91e-30

Toprim1Toprim domain434-54545.22.5e-10

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26553455DNA gyrase subunit B [Mycoplasma penetrans HF-2] 31800.0e+00
gi|171920695DNA gyrase, B subunit [Ureaplasma urealyticum serovar 9 str. ATCC 33175] 22620.0e+00
gi|13357637DNA gyrase, B subunit [Ureaplasma parvum serovar 6 str. ATCC 27818] 22560.0e+00
gi|12044853DNA gyrase, B subunit [synthetic Mycoplasma genitalium JCVI-1.0] 22240.0e+00
gi|13507742DNA gyrase subunit B [Mycoplasma pneumoniae M129] 22190.0e+00
gi|1209515gyrase B 21750.0e+00
gi|31544928GyrB [Mycoplasma gallisepticum R] 21270.0e+00
gi|603237DNA gyrase B subunit 20610.0e+00
gi|15829210DNA GYRASE SUBUNIT B [Mycoplasma pulmonis] 18430.0e+00
gi|47458936DNA gyrase subunit b [Mycoplasma mobile 163K] 18400.0e+00


Maintained by Jun Ishikawa