General features

Gene IDMYPE3080
TypeCDS
From398544
To399470
Strand+
General name
DefinitionABC transporter ATP-binding protein, paralog family
nt length927
aa length308
m.w.35312.31
COG[Q] Secondary metabolites biosynthesis, transport and catabolism


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mmobgi|47459031 unspecified ABC transporter ATP-binding subunit [Mycoplasma mobile 163K]2702.3e-74
bsubgi|16080462 similar to ABC transporter (ATP-binding protein) [Bacillus subtilis]1122.1e-26

*mmob, Mycoplasma mobile; bsub, Bacillus subtilis;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

ABC_tran1ABC transporter106-282139.31.2e-38

SMC_N1RecF/RecN/SMC N terminal domain77-278-141.60.36

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26553762ABC transporter ATP-binding protein [Mycoplasma penetrans HF-2] 13961.5e-152
gi|47459031unspecified ABC transporter ATP-binding subunit [Mycoplasma mobile 163K] 5931.9e-59
gi|50365461putative multidrug ABC transporter ATP-binding component [Mesoplasma florum L1] 4231.0e-39
gi|148377430ABC transporter, ATP binding protein [Mycoplasma agalactiae PG2] 3558.0e-32
gi|110004710hypothetical abc transporter atp-binding component abc transporter protein [Spir... 3361.3e-29
gi|109647391ABC transporter related [Desulfitobacterium hafniense DCB-2] 3271.3e-28
gi|89893303hypothetical protein [Desulfitobacterium hafniense Y51] 3261.5e-28
gi|109645110ABC transporter related [Desulfitobacterium hafniense DCB-2] 3181.5e-27
gi|188586186ABC transporter related [Natranaerobius thermophilus JW/NM-WN-LF] 3162.2e-27
gi|167757911hypothetical protein CLOSCI_00242 [Clostridium scindens ATCC 35704] 3162.4e-27


Maintained by Jun Ishikawa