General features

Gene IDMYPE3650
TypeCDS
From477203
To477937
Strand+
General namernc
Definitionribonuclease III
nt length735
aa length244
m.w.28673.88
COG[K] Transcription


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN545 rnc Ribonuclease III 665609:664761671.7e-13
mgengi|12045228 ribonuclease III (rnc) [Mycoplasma genitalium]716.9e-15
mpulgi|15828634 RIBONUCLEASE III (RNASE III) [Mycoplasma pulmonis]1241.9e-30
mmobgi|47459246 ribonuclease III [Mycoplasma mobile 163K]1201.3e-29
mmycgi|42561014 ribonuclease III [Mycoplasma mycoides subsp. mycoides SC]1271.8e-31
mgalgi|31544697 Rnc [Mycoplasma gallisepticum R]1641.3e-42
uuregi|13357763 ribonuclease III [Ureaplasma urealyticum]1531.8e-39
phytgi|39939094 dsRNA-specific ribonuclease [Onion yellows phytoplasma]1053.6e-25
bsubgi|16078656 ribonuclease III [Bacillus subtilis]1022.8e-23
cacegi|15895025 DsRNA-specific ribonuclease III [Clostridium acetobutylicum]953.1e-21
ecoligi|16130492 ribonuclease III [Escherichia coli K12]715.9e-14

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

Ribonuclease_31RNase3 domain52-139109.51.1e-29

dsrm1Double-stranded RNA binding motif166-23352.02.3e-12

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26553818ribonuclease III [Mycoplasma penetrans HF-2] 9926.7e-106
gi|31544697Rnc [Mycoplasma gallisepticum R] 3341.5e-29
gi|188518513ribonuclease III [Ureaplasma urealyticum serovar 11 str. ATCC 33695] 3232.2e-28
gi|13357763ribonuclease III [Ureaplasma urealyticum serovar 9 str. ATCC 33175] 3204.9e-28
gi|183508806ribonuclease III [Ureaplasma parvum serovar 14 str. ATCC 33697] 3198.0e-28
gi|15615052ribonuclease III [Bacillus halodurans C-125] 2839.9e-24
gi|167755900hypothetical protein CLORAM_01417 [Clostridium ramosum DSM 1402] 2821.3e-23
gi|169350084hypothetical protein CLOSPI_00826 [Clostridium spiroforme DSM 1552] 2812.0e-23
gi|56419727dsRNA-specific ribonuclease [Geobacillus kaustophilus HTA426] 2774.6e-23
gi|70726682ribonuclease III [Staphylococcus haemolyticus JCSC1435] 2767.2e-23


Maintained by Jun Ishikawa