General features

Gene IDMYPE3670
TypeCDS
From478578
To479063
Strand+
General namegreA
Definitiontranscription elongation factor
nt length486
aa length161
m.w.18123.47
COG[K] Transcription


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN401 greA Transcription elongation factor greA 483247:4827651662.0e-43
mgengi|12045138 transcription elongation factor (greA) [Mycoplasma genitalium]1676.7e-44
mpulgi|15829024 TRANSCRIPTION ELONGATION FACTOR GREA (TRANSCRIPT CLEAVAGE FACTOR GREA) [Mycoplasma pulmonis]1277.2e-32
mmobgi|47459270 transcription elongation factor [Mycoplasma mobile 163K]1148.8e-28
mmycgi|42560844 transcription elongation factor [Mycoplasma mycoides subsp. mycoides SC]1492.5e-38
mgalgi|31544396 GreA [Mycoplasma gallisepticum R]1822.5e-48
uuregi|13357864 transcription elongation factor [Ureaplasma urealyticum]1231.1e-30
phytgi|39938788 transcription elongation factor [Onion yellows phytoplasma]1292.2e-32
bsubgi|16079786 transcription elongation factor [Bacillus subtilis]1311.7e-32
cacegi|15896445 Transcription elongation factor, greA [Clostridium acetobutylicum]1266.8e-31
ecoligi|49176324 transcription elongation factor GreA [Escherichia coli K12]1073.9e-25

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

GreA_GreB_N1Prokaryotic transcription elongation fact3-76130.84.3e-36

GreA_GreB1Prokaryotic transcription elongation fact84-16172.21.9e-18

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26553820transcription elongation factor GreA [Mycoplasma penetrans HF-2] 6642.4e-68
gi|31544396GreA [Mycoplasma gallisepticum R] 3839.5e-36
gi|13508140transcription elongation factor [Mycoplasma pneumoniae M129] 3693.7e-34
gi|12045138transcription elongation factor GreA [synthetic Mycoplasma genitalium JCVI-1.0] 3651.0e-33
gi|169350015hypothetical protein CLOSPI_00755 [Clostridium spiroforme DSM 1552] 3093.2e-27
gi|167925614transcription elongation factor [Mycoplasma mycoides subsp. mycoides LC str. GM1... 3093.5e-27
gi|110005071probable transcription elongation factor grea protein [Spiroplasma citri] 3093.7e-27
gi|167756790hypothetical protein CLORAM_02339 [Clostridium ramosum DSM 1402] 3076.6e-27
gi|83319925transcription elongation factor GreA [Mycoplasma capricolum subsp. capricolum AT... 3051.1e-26
gi|42560844transcription elongation factor [Mycoplasma mycoides subsp. mycoides SC str. PG1... 3022.3e-26


Maintained by Jun Ishikawa