General features

Gene IDMYPE4060
TypeCDS
From531024
To532304
Strand+
General nameserS
Definitionseryl-tRNA synthetase
nt length1281
aa length426
m.w.48379.78
COG[J] Translation, ribosomal structure and biogenesis


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN005 serS Seryl-tRNA synthetase 7312:85743957.1e-112
mgengi|12044855 seryl-tRNA synthetase (serS) [Mycoplasma genitalium]3941.2e-111
mpulgi|15828505 SERYL-TRNA SYNTHETASE (SERINE--TRNA LIGASE) [Mycoplasma pulmonis]3025.9e-84
mmobgi|47458927 seryl-tRNA synthetase [Mycoplasma mobile 163K]3471.3e-97
mmycgi|42560626 Serine-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC]3458.6e-97
mgalgi|31544926 SerS [Mycoplasma gallisepticum R]4063.0e-115
uuregi|13357663 seryl-tRNA synthetase [Ureaplasma urealyticum]4518.1e-129
phytgi|39938569 seryl-tRNA synthetase [Onion yellows phytoplasma]3532.5e-99
bsubgi|16077081 seryl-tRNA synthetase [Bacillus subtilis]4292.0e-121
cacegi|15893319 Seryl-tRNA synthetase (serine-tRNA ligase) [Clostridium acetobutylicum]4122.4e-116
ecoligi|16128860 seryl-tRNA synthetase [Escherichia coli K12]3753.0e-105

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

tRNA-synt_2b1tRNA synthetase class II core domain (G,174-344206.01e-58

Seryl_tRNA_N1Seryl-tRNA synthetase N-terminal domain1-109124.73.1e-34

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26553858seryl-tRNA synthetase [Mycoplasma penetrans HF-2] 20220.0e+00
gi|89211543Seryl-tRNA synthetase, class IIa [Halothermothrix orenii H 168] 11597.4e-125
gi|167629223seryl-tRNA synthetase [Heliobacterium modesticaldum Ice1] 11434.4e-123
gi|27262200Seryl-tRNA synthetase [Heliobacillus mobilis] 11418.0e-123
gi|188518695seryl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str. ATCC 33695] 11363.1e-122
gi|89100960seryl-tRNA synthetase [Bacillus sp. NRRL B-14911] 11363.3e-122
gi|188524127seryl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC 33175] 11354.0e-122
gi|171920715seryl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str. ATCC 33698] 11344.8e-122
gi|46908933seryl-tRNA synthetase [Listeria monocytogenes HPB2262] 11345.3e-122
gi|185178824seryl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC 27819] 11337.3e-122


Maintained by Jun Ishikawa