General features

Gene IDMYPE4090
TypeCDS
From538342
To540138
Strand+
General name
DefinitionABC transporter ATP-binding protein, MYPE2470 paralog
nt length1797
aa length598
m.w.66328.14
COG[Q] Secondary metabolites biosynthesis, transport and catabolism


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN018 pmd1 Hypothetical ABC transporter ATP-binding protein 19325:211962851.2e-78
mmobgi|47459346 ABC-type multidrug/protein/lipid transport system ATPase component [Mycoplasma mobile 163K]3803.5e-107
uuregi|13357615 transport ATP-binding protein [Ureaplasma urealyticum]2764.0e-76
cacegi|15896527 ABC-type multidrug/protein/lipid transport system, ATPase component [Clostridium acetobutylicum]3777.3e-106

*mpne, Mycoplasma pneumoniae; mmob, Mycoplasma mobile; uure, Ureaplasma urealyticum; cace, Clostridium acetobutylicum;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

ABC_tran1ABC transporter384-567203.94.2e-58

ABC_membrane1ABC transporter transmembrane region16-31195.61.8e-25

SMC_N1RecF/RecN/SMC N terminal domain373-563-124.70.02

MMR_HSR11GTPase of unknown function385-475-26.00.25

7TM_GPCR_Srsx1Serpentine type 7TM GPCR chemorecepto76-335-162.20.28

Oxidored_q31NADH-ubiquinone/plastoquinone oxidore117-286-43.00.37

DUF5401Protein of unknown function (DUF540)37-196-99.40.45

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26553861ABC transporter ATP-binding protein [Mycoplasma penetrans HF-2] 29200.0e+00
gi|73670158uncharacterized ABC transporter, ATPase component [Methanosarcina barkeri str. F... 9814.6e-104
gi|52080538YfiB [Bacillus licheniformis DSM 13] 9456.8e-100
gi|20808868ABC-type multidrug/protein/lipid transport system, ATPase component [Thermoanaer... 9412.0e-99
gi|146295463ABC transporter related [Caldicellulosiruptor saccharolyticus DSM 8903] 9402.4e-99
gi|15896527ABC-type multidrug/protein/lipid transport system, ATPase component [Clostridium... 9351.0e-98
gi|182416856ABC transporter, ATP-binding/permease protein [Clostridium butyricum 5521] 9322.1e-98
gi|146295603ABC transporter related [Caldicellulosiruptor saccharolyticus DSM 8903] 9304.3e-98
gi|167036640ABC transporter related [Thermoanaerobacter pseudethanolicus ATCC 33223] 9232.3e-97
gi|148269761ABC transporter related [Thermotoga petrophila RKU-1] 9205.4e-97


Maintained by Jun Ishikawa