General features

Gene IDMYPE4100
TypeCDS
From540141
To542132
Strand+
General name
DefinitionABC transporter ATP-binding protein, MYPE2470 paralog
nt length1992
aa length663
m.w.74067.25
COG[Q] Secondary metabolites biosynthesis, transport and catabolism


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN019 msbA Hypothetical ABC transporter ATP-binding protein 21108:230123573.5e-100
mgengi|12044865 ABC transporter, ATP-binding protein [Mycoplasma genitalium]3681.2e-103
mmobgi|47459345 ABC-type multidrug/protein/lipid transport system ATPase component [Mycoplasma mobile 163K]4981.3e-142
uuregi|13357616 transport ATP-binding protein [Ureaplasma urealyticum]3142.6e-87
bsubgi|16077889 similar to ABC transporter (ATP-binding protein) [Bacillus subtilis]3917.6e-110
cacegi|15895658 Uncharacterized ABC transporter, ATPase component [Clostridium acetobutylicum]3692.9e-103
ecoligi|16128881 ATP-binding transport protein; multicopy suppressor of htrB [Escherichia coli K12]2862.3e-78

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mmob, Mycoplasma mobile; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

ABC_tran1ABC transporter445-629191.03.2e-54

ABC_membrane1ABC transporter transmembrane region66-35289.61.1e-23

SMC_N1RecF/RecN/SMC N terminal domain434-633-110.70.0019

MMR_HSR11GTPase of unknown function446-555-19.30.061

Spore_III_AE1Stage III sporulation protein AE (spo35-239-288.70.15

Dynamin_N1Dynamin family448-613-39.40.17

DUF9011Protein of unknown function (DUF901)476-600-93.90.33

CbiA1CobQ/CobB/MinD/ParA nucleotide bindin448-633-45.50.44

DUF2051Domain of unknown function DUF67-235-115.00.44

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26553862ABC transporter ATP-binding protein [Mycoplasma penetrans HF-2] 31030.0e+00
gi|47459345ABC-type multidrug/protein/lipid transport system ATPase component [Mycoplasma m... 11912.1e-128
gi|73670159multidrug resistance ABC transporter [Methanosarcina barkeri str. Fusaro] 11043.1e-118
gi|146295576ABC transporter related [Caldicellulosiruptor saccharolyticus DSM 8903] 10408.1e-111
gi|124520414ABC transporter related [Bacillus coagulans 36D1] 10282.1e-109
gi|153854206hypothetical protein DORLON_01505 [Dorea longicatena DSM 13814] 10254.6e-109
gi|166982510ABC transporter, ATP-binding/permease protein [Bacillus cereus H3081.97] 10131.1e-107
gi|170288447ABC transporter transmembrane region [Thermotoga sp. RQ2] 10121.5e-107
gi|148269760ABC transporter, transmembrane region [Thermotoga petrophila RKU-1] 10102.1e-107
gi|47570138ABC transporter, ATP-binding/permease protein [Bacillus cereus G9241] 10102.4e-107


Maintained by Jun Ishikawa