General features

Gene IDMYPE4830
TypeCDS
From618467
To621421
Strand+
General name
Definitionstructural maintenance of chromosomes SMC superfamily proteins
nt length2955
aa length984
m.w.111424.87
COG[D] Cell cycle control, cell division, chromosome partitioning


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN426 P115 protein homolog 514542:5115947591.2e+00
mgengi|12045154 P115 protein [Mycoplasma genitalium]7684.1e-01
mpulgi|15829185 P115-LIKE (Mycoplasma hyorhinis) ABC TRANSPORTER ATP-BINDING PROTEIN [Mycoplasma pulmonis]5833.3e-168
mmobgi|47459245 segregation of chromosomes protein [Mycoplasma mobile 163K]6362.6e-03
mmycgi|42561011 P115-like protein with SMC_C motif [Mycoplasma mycoides subsp. mycoides SC]5635.1e-162
mgalgi|31544374 Smc-like [Mycoplasma gallisepticum R]7532.1e-02
uuregi|13357697 p115 protein [Ureaplasma urealyticum]6551.9e-03
bsubgi|16078657 chromosome segregation SMC protein homolg [Bacillus subtilis]3371.5e-93
cacegi|15895028 Chromosome segregation SMC protein, ATPase [Clostridium acetobutylicum]4202.2e-118
ecoligi|49176247 protein used in recombination and DNA repair [Escherichia coli K12]435.2e-05

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

SMC_N1RecF/RecN/SMC N terminal domain3-966349.56.4e-102

SMC_hinge1SMC proteins Flexible Hinge Domain416-536110.74.9e-30

ABC_tran1ABC transporter742-962-44.60.0099

PLC-beta_C1PLC-beta C terminal598-792-83.00.034

Myosin_tail_11Myosin tail206-878-563.80.31

DUF23531Uncharacterized coiled-coil protein (226-463-163.90.35

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26553935structural maintenance of chromosomes SMC superfamily proteins [Mycoplasma penet... 44130.0e+00
gi|13508165SMC family, chromosome/DNA binding/protecting functions [Mycoplasma pneumoniae M... 17480.0e+00
gi|12045154chromosome segregation protein SMC [synthetic Mycoplasma genitalium JCVI-1.0] 17260.0e+00
gi|31544374Smc-like [Mycoplasma gallisepticum R] 16860.0e+00
gi|110004292hypothetical chromosome segregation smc protein [Spiroplasma citri] 15005.7e-164
gi|34849448chromosome segregation ATPase [Spiroplasma kunkelii] 14871.7e-162
gi|188524094p115 protein [Ureaplasma urealyticum serovar 12 str. ATCC 33696] 14791.5e-161
gi|185178803p115 protein [Ureaplasma urealyticum serovar 11 str. ATCC 33695] 14772.9e-161
gi|195867740p115 protein [Ureaplasma urealyticum serovar 9 str. ATCC 33175] 14763.9e-161
gi|171920660p115 protein [Ureaplasma urealyticum serovar 13 str. ATCC 33698] 14649.5e-160


Maintained by Jun Ishikawa