General features

Gene IDMYPE4850
TypeCDS
From622513
To622836
Strand+
General name
Definitionconserved hypothetical protein
nt length324
aa length107
m.w.12803.47
COG[S] Function unknown


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN424 ylxM Hypothetical protein 510561:510253582.8e-11
mpulgi|15829144 conserved hypothetical protein [Mycoplasma pulmonis]453.0e-07
mmobgi|47458888 hypothetical protein MMOB0530 [Mycoplasma mobile 163K]412.1e-06
mmycgi|42561025 gene regulatory 13K protein [Mycoplasma mycoides subsp. mycoides SC]609.6e-12
mgalgi|31544376 conserved hypothetical [Mycoplasma gallisepticum R]575.9e-11
uuregi|13357699 conserved hypothetical [Ureaplasma urealyticum]568.0e-11
bsubgi|16078660 similar to hypothetical proteins [Bacillus subtilis]732.5e-15
cacegi|15895030 Uncharacterized conserved protein, YLXM B.subtilis ortholog [Clostridium acetobutylicum]741.0e-15
ecoligi|16130908 putative ARAC-type regulatory protein [Escherichia coli K12]272.2e-01

*mpne, Mycoplasma pneumoniae; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

UPF01221Putative helix-turn-helix protein, YlxM /2-10391.72.6e-24

HTH_101HTH DNA binding domain20-65-2.00.012

Sigma70_r41Sigma-70, region 418-65-1.10.11

HTH_psq1helix-turn-helix, Psq domain21-657.00.36

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26553937conserved hypothetical protein [Mycoplasma penetrans HF-2] 3991.4e-37
gi|83589814Putative helix-turn-helix protein, YlxM/p13-like [Moorella thermoacetica ATCC 39... 1552.6e-09
gi|169830838putative helix-turn-helix protein, YlxM/p13 family protein [Candidatus Desulforu... 1534.0e-09
gi|51892602conserved hypothetical protein [Symbiobacterium thermophilum IAM 14863] 1509.2e-09
gi|160933327hypothetical protein CLOLEP_02172 [Clostridium leptum DSM 753] 1463.2e-08
gi|160880542putative helix-turn-helix protein YlxM/p13 family protein [Clostridium phytoferm... 1463.3e-08
gi|121533797putative helix-turn-helix protein, YlxM/p13 family protein [Thermosinus carboxyd... 1453.9e-08
gi|56964060conserved hypothetical protein [Bacillus clausii KSM-K16] 1444.8e-08
gi|167758973hypothetical protein CLOSCI_01319 [Clostridium scindens ATCC 35704] 1445.4e-08
gi|148985188hypothetical protein CGSSp3BS71_02358 [Streptococcus pneumoniae SP3-BS71] 1436.8e-08


Maintained by Jun Ishikawa