General features

Gene IDMYPE5650
TypeCDS
From719197
To719757
Strand+
General namedef
Definitionpolypeptide deformylase
nt length561
aa length186
m.w.21540.54
COG[J] Translation, ribosomal structure and biogenesis


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN245 def Peptide deformylase 297788:2971381731.5e-45
mgengi|12044958 polypeptide deformylase (def) [Mycoplasma genitalium]1921.4e-51
mpulgi|15829160 POLYPEPTIDE DEFORMYLASE 2 (PDF 2) (FORMYLMETHIONINE DEFORMYLASE 2) [Mycoplasma pulmonis]771.4e-16
mmobgi|47459452 formylmethionine deformylase [Mycoplasma mobile 163K]1061.8e-25
mmycgi|42560770 Peptide deformylase [Mycoplasma mycoides subsp. mycoides SC]1071.0e-25
mgalgi|31544845 Def [Mycoplasma gallisepticum R]1801.5e-47
uuregi|13358028 polypeptide deformylase [Ureaplasma urealyticum]1578.4e-41
bsubgi|16078520 similar to formylmethionine deformylase [Bacillus subtilis]1143.6e-27
cacegi|15894999 N-formylmethionyl-tRNA deformylase [Clostridium acetobutylicum]561.1e-09
ecoligi|16131166 peptide deformylase [Escherichia coli K12]575.9e-10

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

Pep_deformylase1Polypeptide deformylase9-177208.61.7e-59

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26554017polypeptide deformylase [Mycoplasma penetrans HF-2] 9332.2e-99
gi|1361510formylmethionine deformylase homolog - Mycoplasma genitalium 4861.7e-47
gi|2507258Peptide deformylase (PDF) (Polypeptide deformylase) 4825.2e-47
gi|108885085peptide deformylase [synthetic Mycoplasma genitalium JCVI-1.0] 4743.6e-46
gi|31544845Def [Mycoplasma gallisepticum R] 4422.1e-42
gi|13507984polypeptide deformylase [Mycoplasma pneumoniae M129] 4403.8e-42
gi|7109689polypeptide deformylase [Mycoplasma gallisepticum] 4313.8e-41
gi|13358028peptide deformylase [Ureaplasma parvum serovar 3 str. ATCC 27815] 3769.2e-35
gi|6225247N-formylmethionylaminoacyl-tRNA deformylase [Geobacillus stearothermophilus] 3274.8e-29
gi|56419592peptide deformylase2 (PDF 2) N-formylmethionylaminoacyl-tRNA deformylase [Geobac... 3151.2e-27


Maintained by Jun Ishikawa