General features

Gene IDMYPE5880
TypeCDS
From743138
To741504
Strand-
General name
Definitionsugar ABC transporter permease
nt length1635
aa length544
m.w.61666.49
COG[R] General function prediction only


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN259 Hypothetical protein 309731:3112843242.0e-90
mgengi|12044972 conserved hypothetical protein [Mycoplasma genitalium]3293.6e-92
mpulgi|15829089 SUGAR ABC TRANSPORTER PERMEASE PROTEIN [Mycoplasma pulmonis]1575.3e-40
mmobgi|47458873 unspecified sugar ABC transport permease protein [Mycoplasma mobile 163K]1772.4e-46
mmycgi|42560569 Ribose/Galactose ABC transporter, permease component I [Mycoplasma mycoides subsp. mycoides SC]1675.5e-43
mgalgi|31544792 ABC-type transport system permease [Mycoplasma gallisepticum R]3802.3e-107
uuregi|13357570 ribose/galactose ABC transporter (N-term domain) [Ureaplasma urealyticum]2142.2e-57
bsubgi|16080208 similar to hypothetical proteins [Bacillus subtilis]1002.1e-22
cacegi|15893992 Sugar ABC transporter, permease protein [Clostridium acetobutylicum]1002.6e-22
ecoligi|16129474 putative ABC transport system permease protein [Escherichia coli K12]534.5e-08

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_21Branched-chain amino acid transport s69-356185.71.3e-52

BCCT1BCCT family transporter9-336-431.20.012

C4dic_mal_tran1C4-dicarboxylate transporter/malic ac98-337-98.20.1

FecCD1FecCD transport family35-315-221.50.36

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26554040sugar ABC transporter permease [Mycoplasma penetrans HF-2] 26650.0e+00
gi|31544792ABC-type transport system permease [Mycoplasma gallisepticum R] 8344.2e-87
gi|13507998sugar (ribose/galactose) ABC transporter permease subunit, but probably C-termin... 7601.8e-78
gi|12044972ABC transporter, permease protein [synthetic Mycoplasma genitalium JCVI-1.0] 7521.3e-77
gi|183508487ribose/galactose ABC transporter [Ureaplasma parvum serovar 14 str. ATCC 33697] 4912.9e-47
gi|13357570ribose/galactose ABC transporter [Ureaplasma parvum serovar 6 str. ATCC 27818] 4894.2e-47
gi|188592631ribose/galactose ABC transporter [Ureaplasma urealyticum serovar 10] 4832.2e-46
gi|171920546ribose/galactose ABC transporter [Ureaplasma urealyticum serovar 9 str. ATCC 331... 4822.8e-46
gi|188568813ribose/galactose ABC transporter [Ureaplasma urealyticum serovar 2] 4823.0e-46
gi|66880365COG4603: ABC-type uncharacterized transport system, permease component [Mycoplas... 3792.5e-34


Maintained by Jun Ishikawa