General features

Gene IDMYPE6480
TypeCDS
From830334
To828439
Strand-
General nameparE
DefinitionDNA topoisomerase IV subunit B
nt length1896
aa length631
m.w.71422.85
COG[L] Replication, recombination and repair


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN122 parB Topoisomerase IV subunit B 156467:1583746826.4e-161
mgengi|12045055 topoisomerase IV subunit B (parE) [Mycoplasma genitalium]6791.6e-164
mpulgi|15828843 TOPOISOMERASE IV SUBUNIT B [Mycoplasma pulmonis]7163.3e-159
mmobgi|47459221 topoisomerase IB subunit B [Mycoplasma mobile 163K]7083.7e-148
mmycgi|42561045 DNA TOPOISOMERASE IV SUBUNIT B [Mycoplasma mycoides subsp. mycoides SC]7011.3e-03
mgalgi|31544624 ParE/GyrB [Mycoplasma gallisepticum R]7732.7e-03
uuregi|13358029 topoisomerase IV subunit B [Ureaplasma urealyticum]7793.7e-03
bsubgi|16078870 DNA gyrase-like protein (subunit B) [Bacillus subtilis]6803.0e-173

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

DNA_gyraseB1DNA gyrase B219-390271.02.7e-78

DNA_gyraseB_C1DNA gyrase B subunit, carboxyl terminus556-622157.63.7e-44

HATPase_c1Histidine kinase-, DNA gyrase B-, and H29-173109.98.3e-30

Toprim1Toprim domain448-52926.10.00011

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26554100DNA topoisomerase IV subunit B [Mycoplasma penetrans HF-2] 30670.0e+00
gi|171920400DNA topoisomerase IV, B subunit [Ureaplasma parvum serovar 1 str. ATCC 27813] 19760.0e+00
gi|185179126DNA topoisomerase IV, B subunit [Ureaplasma urealyticum serovar 11 str. ATCC 336... 19710.0e+00
gi|13358029DNA topoisomerase IV, B subunit [Ureaplasma parvum serovar 3 str. ATCC 27815] 19690.0e+00
gi|186701799DNA topoisomerase IV, B subunit [Ureaplasma parvum serovar 6 str. ATCC 27818] 19680.0e+00
gi|183508547DNA topoisomerase IV, B subunit [Ureaplasma parvum serovar 14 str. ATCC 33697] 19650.0e+00
gi|171920906DNA topoisomerase IV, B subunit [Ureaplasma urealyticum serovar 12 str. ATCC 336... 19430.0e+00
gi|529464topoisomerase II subunit B 19290.0e+00
gi|31544624ParE/GyrB [Mycoplasma gallisepticum R] 19250.0e+00
gi|33860191DNA topoisomerase 4 subunit B (Topoisomerase IV subunit B) (TopIIB) 19220.0e+00


Maintained by Jun Ishikawa