General features

Gene IDMYPE650
TypeCDS
From74531
To75610
Strand+
General nameprfA
Definitionpeptide chain release factor 1
nt length1080
aa length359
m.w.41021.45
COG[J] Translation, ribosomal structure and biogenesis


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN361 prfA Peptide chain release factor 1 430628:4317074062.5e-115
mgengi|12045113 peptide chain release factor 1 (prfA) [Mycoplasma genitalium]4053.3e-115
mpulgi|15828576 PEPTIDE CHAIN RELEASE FACTOR 1 (RF-1) [Mycoplasma pulmonis]3371.3e-94
mmobgi|47459025 peptide chain release factor 1 [Mycoplasma mobile 163K]3111.1e-86
mmycgi|42560702 peptide chain release factor 1 [Mycoplasma mycoides subsp. mycoides SC]3901.5e-110
mgalgi|31544341 PrfA [Mycoplasma gallisepticum R]4323.1e-123
uuregi|13357561 peptide chain release factor 1 [Ureaplasma urealyticum]4684.0e-134
phytgi|39938500 protein chain release factor A [Onion yellows phytoplasma]3141.1e-87
bsubgi|16080754 peptide chain release factor 1 [Bacillus subtilis]3422.0e-95
cacegi|15896138 Protein chain release factor A [Clostridium acetobutylicum]3405.4e-95
ecoligi|16129174 peptide chain release factor 1 [Escherichia coli K12]3014.4e-83

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

RF-11RF-1 domain209-322243.84.1e-70

PCRF1PCRF domain66-180176.95.6e-50

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26553517peptide chain release factor 1 [Mycoplasma penetrans HF-2] 16470.0e+00
gi|13357561peptide chain release factor 1 [Ureaplasma parvum serovar 6 str. ATCC 27818] 11221.1e-120
gi|171920548peptide chain release factor 1 [Ureaplasma urealyticum serovar 9 str. ATCC 33175... 11141.0e-119
gi|188592638peptide chain release factor 1 [Ureaplasma urealyticum serovar 10] 11131.2e-119
gi|31544341PrfA [Mycoplasma gallisepticum R] 10011.1e-106
gi|46576715Peptide chain release factor 1 (RF-1) 10011.2e-106
gi|13508100peptide chain release factor 1 [Mycoplasma pneumoniae M129] 9768.5e-104
gi|12045113peptide chain release factor 1 [synthetic Mycoplasma genitalium JCVI-1.0] 9542.9e-101
gi|121534882peptide chain release factor 1 [Thermosinus carboxydivorans Nor1] 9141.4e-96
gi|50365449peptide chain release factor 1 [Mesoplasma florum L1] 9051.5e-95


Maintained by Jun Ishikawa